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Data from: Highly divergent 16S rRNA sequences in ribosomal operons of Scytonema hyalinum (Cyanobacteria)
负责人:
关键词:
multiple operons;operon heterogeneity;Hassallia;Cyanobacteria;Scytonema chiastum;Scytonema;Scytonema hofmannii;Scytonema hyalinum;Brasilonema;Horizontal gene transfer;Scytonema arcangelii;16S rRNA gene
DOI:
doi:10.5061/dryad.6s386
摘要:
A highly divergent 16S rRNA gene was found in one of the five ribosomal operons present in a species complex currently circumscribed as Scytonema
Data from: A comparison between transcriptome sequencing and 16S metagenomics for detection of bacterial pathogens in wildlife
负责人:
关键词:
NGS RNA-Seq 16S metagenomics metabarcoding 454-pyrosequencing MiSeq bacteria rodent-borne zoonoses coinfections pathobiome
DOI:
doi:10.5061/dryad.50125
摘要:
. DNA extracts were analyzed via a 16S-metagenomics approach using two sequencers: the 454 GS-FLX and the MiSeq. The V4 region of the gene coding for 16S rRNA
Data from: COI is better than 16S rRNA for DNA barcoding Asiatic salamanders (Amphibia: Caudata: Hynobiidae)
负责人:
Xia, Yun
关键词:
Amphibians DNA Barcoding species identification cryptic species
DOI:
doi:10.5061/dryad.p4r84
摘要:
to be highly variable in amphibians, sequencing is often challenging. Consequently, another mtDNA gene, 16S rRNA gene, is often advocated for amphibian barcoding
Data from: Phylogenetic relatedness determined between antibiotic resistance and 16S rRNA genes in actinobacteria
负责人:
关键词:
Actinobacteria;resistance genes;phylogeny;Actinobacteria;sequenced genome database;16S rRNA diversity;thin layer chromatography
DOI:
doi:10.5061/dryad.td742
摘要:
by 16S rRNA gene, for presence of erm and ABC transporter resistance genes and antibiotic production. An analogous analysis was performed in silico with 246 and 31
Data from: Bacterial characterization of Beijing drinking water by flow cytometry and MiSeq sequencing of the 16S rRNA gene
负责人:
关键词:
Flow cytometry;MiSeq sequencing;Opportunistic pathogenic bacteria;Drinking water quality monitoring;Fluorescence fingerprints
DOI:
doi:10.5061/dryad.55nb0
摘要:
Flow cytometry (FCM) and 16S rRNA gene sequencing data are commonly used to monitor and characterize microbial differences
Data from: Additional Support for Afrotheria and Paenungulata, the Performance of Mitochondrial versus Nuclear Genes, and the Impact of Data Partitions with Heterogeneous Base Composition
负责人:
关键词:
phylogeny reconstruction;base composition
DOI:
doi:10.5061/dryad.393
摘要:
We concatenated sequences for four mitochondrial genes (12S rRNA, tRNA valine, 16S rRNA, cytochrome b) and four nuclear genes [aquaporin, alpha 2
Data from: Drivers shaping the diversity and biogeography of total and active bacterial communities in the South China Sea
负责人:
关键词:
Environmental selection;Active versus total bacterial communities;diversity;Biogeography;Network interaction;Geographic distance
DOI:
doi:10.5061/dryad.s8c2c
摘要:
to the SCS basin, using 454 pyrosequencing of the 16S rRNA and 16S rRNA gene (V1-3 regions) and thereby, characterizing the active and total bacteria
Data from: Long-term balanced fertilization improves the soil microbial functional diversity in a phosphorus-limited paddy soil
负责人:
关键词:
long-term fertilization chemical fertilizer GeoChip 16S rRNA gene pyrosequencing soil microbial community
DOI:
doi:10.5061/dryad.t64s0
摘要:
and environmental sciences and is critical for linking soil microbial flora with soil functions. In this study, 16S rRNA gene pyrosequencing and a functional gene
Data from: Drivers and patterns of microbial community assembly in a Lyme disease vector
负责人:
关键词:
Lyme disease;NexGen sequencing;tick;16S rRNA;Ixodes pacificus;Rickettsia;microbiome;community assembly
DOI:
doi:10.5061/dryad.2nv32qh
摘要:
understanding of the processes shaping the vector microbiome and the interactions therein. Here we use 16S rRNA sequencing and apply a community ecology framework

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