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Data from: A comparison between transcriptome sequencing and 16S metagenomics for detection of bacterial pathogens in wildlife
- 负责人：
- 关键词：
- NGS RNA-Seq 16S metagenomics metabarcoding 454-pyrosequencing MiSeq bacteria rodent-borne zoonoses coinfections pathobiome
- DOI：
- doi:10.5061/dryad.50125
- 摘要：
- s not been assessed. Here, we compared two NGS approaches, RNA-Sequencing (RNA-Seq) and 16S-metagenomics, assessing their ability to survey neglected zoonotic bacteria
Data from: Using metagenomics to show the efficacy of forest restoration in the New Jersey Pine Barrens
- 负责人：
- DOI：
- doi:10.5061/dryad.mt048
- 摘要：
- 4-year old AWC stands—the latter two stands being restored from long-term cranberry bogs. A metagenomic analysis of eDNA extracted from these soils sh
Data from: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
- 负责人：
- DOI：
- doi:10.5061/dryad.q2n78
- 摘要：
- pool of living biomass in terrestrial ecosystems. We used metagenomic sequencing to compare the composition and functional attributes of 16
Data from: The impact of tropical forest logging and oil palm agriculture on the soil microbiome
- 负责人：
- DOI：
- doi:10.5061/dryad.17n4d
- 摘要：
- microbiome to these land-use changes are poorly understood. Using 16S rRNA gene and shotgun metagenomic sequencing, we compared composition
Data from: Soil microbiome responses to the short-term effects of Amazonian deforestation
- 负责人：
- DOI：
- doi:10.5061/dryad.071p0
- 摘要：
- microbiome is not known. Using next generation sequencing of 16S rRNA gene and shotgun metagenomic DNA, we compared the structure and the potential functions
Data from: Deciphering conjugative plasmid permissiveness dynamics in wastewater microbiomes
- 负责人：
- DOI：
- doi:10.5061/dryad.636b0
- 摘要：
- ng the broad host-range IncP-1 conjugative plasmid, pKJK5. A thorough molecular approach coupling metagenomes to 16S rRNA DNA/cDNA amplic
Data from: Metagenomic sequencing detects respiratory pathogens in hematopoietic cellular transplant patients
- 负责人：
- DOI：
- doi:10.5061/dryad.800tj
- 摘要：
- the utility of metagenomic next generation sequencing (mNGS) of bronchoalveolar lavage (BAL) to detect microbial pathogens in HCT patients with acute
Data from: Succession and dynamics of Pristionchus nematodes and their microbiome during decomposition of Oryctes beetles on La Réunion Island
- 负责人：
- Sommer, Ralf J.
- 关键词：
- metagenome microbiome
- DOI：
- doi:10.5061/dryad.3c153
- 摘要：
- of the genus Pristionchus are found on scarab beetles with more than 30 species known from worldwide samplings. However, little is known about the dynamics
Data from: Convergence of gut microbiomes in myrmecophagous mammals
- 负责人：
- DOI：
- doi:10.5061/dryad.390ng
- 摘要：
- of convergence in gut microbiome composition over evolutionary timescales. This study sets the scene for future metagenomic studies aiming at evaluating potential
Data from: The core microbiome bonds the Alpine bog vegetation to a transkingdom metacommunity
- 负责人：
- DOI：
- doi:10.5061/dryad.8n2d5
- 摘要：
- in two Alpine bogs in Austria by 16S rDNA amplicon sequencing followed by bioinformatic analyses. The overall bog microbiome was classified into 32 mic
