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Data from: Optimisation of next generation sequencing transcriptome annotation for species lacking sequenced genomes
负责人:
关键词:
Genomics\/Proteomics;Transcriptomics;molecular evolution;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.2v3h4
摘要:
e been studied in ecological contexts but lack a sequenced genome. However, the efficacy and accuracy of RNA-seq annotation methods using reference genomes from
Data from: Phased whole-genome genetic risk in a family quartet using a major allele reference sequence
负责人:
关键词:
DOI:
doi:10.5061/dryad.34q0d
摘要:
thrombophilia. We demonstrate that the use of the major allele reference sequence results in improved genotype accuracy for disease-associated variant loci
Data from: Sex chromosome turnover contributes to genomic divergence between incipient stickleback species
负责人:
关键词:
chromosomal fusions;microarray;sex chromosome;QTL;Whole genome sequence;comparative genome hybridization;stickleback;Gasterosteus aculeatus;speciation
DOI:
doi:10.5061/dryad.40nk2
摘要:
to phenotypic divergence and reproductive isolation between these sympatric species. To investigate the genomic basis for the accumulation of genes important for speciation
Data from: Genetic distance as an alternative to physical distance for definition of gene units in association studies
负责人:
关键词:
pathway analysis;recombination rate;Gene definition;Gene-set analysis;Recombination map;Homo Sapiens;Genetic distance;genetic map
DOI:
doi:10.5061/dryad.p58hb
摘要:
of analysis. These genes include the coding sequence plus flanking sequences. Polymorphisms in the flanking sequences are of interest because they involve
Data from: The complete genome sequence of the thermophilic bacterium Laceyella sacchari FBKL4.010 reveals the basis for tetramethylpyrazine
负责人:
关键词:
Laceyella sacchari;antiSMASH analysis;Microbiology;Complete genome;Moutai-flavor Daqu;Tetramethylpyrazine;Liquor-making
DOI:
doi:10.5061/dryad.82gn3m6
摘要:
, we identified that the genome contains genes encoding key enzymes such as proteases, peptidases, and acetolactate synthase (ALS) of the tetramethylpyrazine
Data from: Linking innate immunogenetic variation with phenotypic traits in a wild population of tree swallows, Tachycineta bicolor
负责人:
关键词:
bacterial killing ability;synonymous and non-synonymous SNPs;Tachycineta bicolor;beta(b)-defensin;passerine bird;eggshell bacteria
DOI:
doi:10.5061/dryad.5k5k0
摘要:
genes, BKA and eggshell bacteria. Our results suggested that homozygosity at some loci may be advantageous for defence against bacteria. Variability
Data from: A high-density exome capture genotype-by-sequencing panel for forestry breeding in Pinus radiata
负责人:
关键词:
Exome Capture;genotypes;read depth;Pinus radiata
DOI:
doi:10.5061/dryad.03c7292
摘要:
is achieved. Using a transcriptome-based reference template, we have successfully developed a high density exome capture genotype-by-sequencing pane
Data from: Aligner optimization increases accuracy and decreases compute times in multi-species sequence data
负责人:
关键词:
Plasmodium falciparum;alignments;Brugia malayi;Wolbachia;metagenomics;bioinformatics;genomics;Homo Sapiens;parasite genomics;dual species RNASeq;microbial genomics
DOI:
doi:10.5061/dryad.m1m0p
摘要:
of read pairs from the majority sequence member that incorrectly aligned to the reference genome of the minority sequence member. Combining both source
Data from: Population genomics of parallel hybrid zones in the mimetic butterflies, H. melpomene and H. erato
负责人:
关键词:
Heliconius timareta;genome-wide association mapping;Hybrid zones;convergent evolution;Heliconius erato;adaptive divergence;RAD sequencing;Heliconius melpomene
DOI:
doi:10.5061/dryad.1nc50
摘要:
ross two pairs of parallel hybrid zones in Peru and Ecuador. We compare two approaches for analysis of this type of data; alignment to a reference genome
Data from: Interspecific genetics of speciation phenotypes: song and preference coevolution in Hawaiian crickets
负责人:
关键词:
parallel evolution;Laupala;sexual selection;Laupala cerasina;polygenic traits
DOI:
doi:10.5061/dryad.s3937
摘要:
crickets presents an unusual opportunity to compare the genetic basis of divergence across independent evolutionary histories. Previous studies of one pair

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