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Data from: Multiple maize reference genomes impact the identification of variants by GWAS in a diverse inbred panel
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.dk22g4h
- 摘要：
- Use of a single reference genome for genome-wide association studies (GWAS) limits the gene space represented to that of a single acces
Data from: Performance of gene expression analyses using de novo assembled transcripts in polyploid species
- 负责人：
- DOI：
- doi:10.5061/dryad.4p6n481
- 摘要：
- to the reference genes. However, in species that experienced more recent polyploidy events, the percentage decreased to 21–65%. Gene co-expression network analyses usi
Data from: Two low coverage bird genomes and a comparison of reference-guided versus de novo genome assemblies
- 负责人：
- DOI：
- doi:10.5061/dryad.qn1n2
- 摘要：
- columbiana). We used these data to estimate de novo genome assemblies and reference-guided assemblies, and compared the information content and completenes
Data from: Testing pipelines for genome-wide SNP calling from Genotyping-By-Sequencing (GBS) data for Pinus ponderosa
- 负责人：
- DOI：
- doi:10.5061/dryad.6fv8fb4
- 摘要：
- pipelines two of which require a reference genome (TASSEL-GBS V2 and Stacks), two of which are de novo pipelines (UNEAK and Stacks). Using Illumina sequence
Transcriptome sequencing of Capra hircus for different tissues.
- 负责人：
- BGI
- DOI：
- doi:10.26036/cnphis0000942
- 摘要：
- nic basis underlying the development of cashmere fibers using the goat reference genome assembly and annotated genes, we extracted RNA samples of primary
Data from: A whole-transcriptome approach to evaluating reference genes for quantitative gene expression studies: a case study in Mimulus
- 负责人：
- DOI：
- doi:10.5061/dryad.84655
- 摘要：
- on the use of reliable, stably expressed reference genes. With the increased availability of high-throughput methods for measuring gene expression, whole
Data from: De novo assembly of a chromosome-level reference genome of red spotted grouper (Epinephelus akaara) using nanopore sequencing and Hi-C
- 负责人：
- DOI：
- doi:10.5061/dryad.4398b9f
- 摘要：
- , molecular resources for E. akaara remain limited and no reference genome has been published to date. In this study, we constructed a chromosome-level
Data from: Chromosome-level reference genome of X12, a highly virulent race of the soybean cyst nematode Heterodera glycines
- 负责人：
- DOI：
- doi:10.5061/dryad.5b2m501
- 摘要：
- Eukaryotic Genes Mapping Approach (CEGMA) and Benchmarking Universal Single-Copy Orthologs (BUSCO). A total of 11,882 genes were predicted using De novo, Homolog
Data from: The complete sequence of the mitochondrial genome of Butomus umbellatus - a member of an early branching lineage of monocotyledons
- 负责人：
- DOI：
- doi:10.5061/dryad.42gc4
- 摘要：
- 2. Gene order is also largely unconserved. However, based on its phylogenetic position within the core alismatids Butomus will serve as a good reference point
nchor: a novel approach for whole-genome comparative mapping utilising evolutionarily conserved DNA sequences"" data-category="" data-cropid="" data-dimen="" data-id="259A5B2C-B6B6-492D-834C-D41955585C5A"> Supporting data for "G-Anchor: a novel approach for whole-genome comparative mapping utilising evolutionarily conserved DNA sequences"
- 负责人：
- 关键词：
- Genome-Mapping Metabolomic Software Workflow whole-genome alignment sequence mapping sequencing anchoring highly conserved elements (hce) genome evolution
- DOI：
- doi:10.5524/100415
- 摘要：
- reference genome. G-Anchor makes novel use of a databank of highly conserved DNA sequence elements. We demonstrate how these elements may be aligned to a pair
