Applications of next generation sequencing in sessile marine invertabrates

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Molecular Biology next generation sequencing marine Invertebrates Pacific oyster Crassostrea gigas barnacle Pollicipes polymerus viral resistance circadian and circatidal clocks

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doi:10.25549/usctheses-c89-54761

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t effect the internal clocks will be investigated. To study internal clocks, based on lunar and solar cycles, we focus on the Gooseneck barnacle, Polli

Data from: Phylogenetic relationships and timing of diversification in gonorynchiform fishes inferred using nuclear gene DNA sequences (Teleostei

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Chanos;Cretaceous;Gonorynchus;Ostariophysi;Gonorynchiformes;Parakneria;Jurassic;Kneria;Triassic;Grasseichthys;Cenozoic;Cromeria;Phractolaemus

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doi:10.5061/dryad.hb653

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t provide calibration information in the relaxed molecular clock analysis. The estimated age of the most recent common ancestor (MRCA) of li

Data from: Signaling cascades and the importance of moonlight in coral broadcast mass spawning

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moonlight;Coral;mass spawning;Acropora millepora

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doi:10.5061/dryad.541g6

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mechanisms to ensure accurate timing of gamete release are largely unknown. Here, we show that moonlight is an important external stimulus for mass spawning

Data from: Multiple independent colonizations into the Congo Basin during the continental radiation of African Mastacembelus spiny eels

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Mastacembelus;Biogeography;Continental radiation;Dispersal;molecular dating;Mastacembelidae;diversification dynamics

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doi:10.5061/dryad.1jq96

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molecular phylogeny to date was reconstructed for African spiny eels. Divergence times were estimated applying a Bayesian relaxed clock comparing fossil and geological

Data from: Seasonal temperature, the lunar cycle and diurnal rhythms interact in a combinatorial manner to modulate genomic responses

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Genomics\/Proteomics;environmental genomics;Transcriptomics;transcriptome;Development and Evolution;Cnidarians;Ecological Genetics;Acropora millepora

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doi:10.5061/dryad.g40g7k0

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physiology to global migrations. Molecular mechanisms that generate circadian behaviours in model organisms are well studied, but longer phase cycles and interacti

Data from: Origin and diversification of living cycads: a cautionary tale on the impact of the branching process prior in Bayesian molecular dating

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Cycadales;Permian until Present

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doi:10.5061/dryad.20k7m

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nching priors using the iconic cycads. We conducted phylogenetic estimations for 237 cycad species using three genes and two calibration strategies incorporati