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Data from: Local molecular clocks in three nuclear genes: divergence times for rodents and other mammals and incompatibility among fossil calibrations.
负责人:
关键词:
Placentalia;vWF;Rodentia;A2AB;Eutheria;Mammalia;Supermatrix;IRBP;Glires;phylogeny;molecular dating;maximum likelihood;Cenozoic
DOI:
doi:10.5061/dryad.8502
摘要:
on of molecules is the evolutionary rate variation among lineages, precluding the application of the global molecular clock. We considered 2422 first and sec
Data from: Phylogenetic informativeness reconciles ray-finned fish molecular divergence times
负责人:
关键词:
Actinopterygii;Cichlidae;Eocene;Cretaceous;Homoplasy;Jurassic;Devonian;Triassic;Acanthomorpha;Nucleotide Saturation;Cenozoic;Tetraodontiformes;Teleostei;molecular clock
DOI:
doi:10.5061/dryad.3rq51
摘要:
s: We demonstrate that even with identical calibration regimes and molecular clock methods, mitochondrial based molecular age estimates are systematically older tha
Data from: Tips and nodes are complimentary not competing approaches to the calibration of molecular clocks
负责人:
关键词:
Node;molecular clock;tip;Hymenoptera;calibration
DOI:
doi:10.5061/dryad.2q3k2
摘要:
Molecular clock methodology provides the best means of establishing evolutionary timescales, the accuracy and precision of which remain reli
Data from: Late-glacial demographic expansion motivates a clock overhaul for population genetics
负责人:
关键词:
time-dependency;Calibration of Demographic Transition;Bayesian skyline plots;Expansion Dating;Two-Epoch Model;Molecular Calibration;Molecular Rate
DOI:
doi:10.5061/dryad.3q24t
摘要:
mate demographic parameters. To obtain more reliable rates of molecular evolution for population studies, I propose the Calibration of Demographic Transition (CDT) method
Data from: Testing the molecular clock using mechanistic models of fossil preservation and molecular evolution
负责人:
关键词:
MCMCTREE;molecular clock;Bayesian phylogenetics;fossil record;sampling bias
DOI:
doi:10.5061/dryad.5706p
摘要:
on about absolute times in molecular clock dating analyses. Thus, fossil calibrations are critical to molecular clock dating, but competing methods are difficu
Data from: Major radiations in the evolution of caviid rodents: reconciling fossils, ghost lineages, and relaxed molecular clocks
负责人:
关键词:
Cavioidea sensu stricto;morphology;DNA sequences;Eocardiidae;Hydrochoerinae;\Eocardiidae\;Caviinae;Dolichotinae;TNT;Cenozoic;Caviidae
DOI:
doi:10.5061/dryad.v5p71
摘要:
e, evaluating the time of diversification of selected nodes based on the calibration of phylogenetic trees with fossil taxa and the use of relaxed molecular clocks
Data from: Inflation of molecular clock rates and dates: molecular phylogenetics, biogeography, and diversification of a global cicada radiation from
负责人:
关键词:
calibration relaxed clock maximum-likelihood branch lengths gamma distribution aridification climate change
DOI:
doi:10.5061/dryad.5590q
摘要:
substitution process. Here we explore Bayesian relaxed-clock molecular dating while studying the biogeography of ca. 200 species from the global cicada trib
Data from: The impact of fossil stratigraphic ranges on tip?calibration, and the accuracy and precision of divergence time estimates
负责人:
关键词:
divergence time;molecular clock;Simulation;tip calibration;Ursidae;fossil
DOI:
doi:10.5061/dryad.7kh57t5
摘要:
The molecular clock provides the only viable means of establishing realistic evolutionary timescales but it remains unclear how best to calibrate
Data from: Molecular paleobiology of early-branching animals integrating DNA and fossils elucidates the evolutionary history of hexactinelli
负责人:
Woerheide, Gert
关键词:
molecular paleobiology molecular clocks Bayesian
DOI:
doi:10.5061/dryad.sm01b
摘要:
ng conservative fossil calibration constraints and the largest molecular phylogenetic data set assembled for this group, we infer divergence times of crown-group Hexactinelli
Data from: The timing of eukaryotic evolution: Does a relaxed molecular clock reconcile proteins and fossils?
负责人:
Douzery, Emmanuel J. P.
关键词:
Supermatrix Eukaryotes Phylogeny Timescale Molecular dating
DOI:
doi:10.5061/dryad.8499
摘要:
sts. Due to significant variations in their evolutionary rates, and to handle the uncertainty of the fossil record, we used a Bayesian relaxed molecular clock

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