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Data from: Phylogenomics of horned lizards (genus: Phrynosoma) using targeted sequence capture data
负责人:
关键词:
Species tree;Concatenation;ultraconserved elements;phylogeny;SVD quartets;Phrynosomatidae;systematics;coalescent;Phrynosoma
DOI:
doi:10.5061/dryad.82p92
摘要:
nes, restriction site associated DNA (RAD) sequencing, or mitochondrial DNA (mtDNA) have produced conflicting relationships. Some of these conflicts are li
Data from: Assessing the utility of eDNA as a tool to survey reef-fish communities in the Red Sea
负责人:
关键词:
Metabarcoding;biodiversity;Environmental DNA;Next-generation sequencing;Coral reef
DOI:
doi:10.5061/dryad.1pm20
摘要:
ng fish-specific 16S mitochondrial DNA primers, and sequenced using a metabarcoding workflow. DNA sequences were assigned to taxa using available ge
Data from: Antarctic krill population genomics: apparent panmixia, but genome complexity and large population size muddies the water
负责人:
关键词:
genotyping-by-sequencing;Zooplankton;Euphausia superba;repetitive DNA;RAD sequencing;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.3023m
摘要:
er of markers and have covered only part of their circum-Antarctic range. We used mitochondrial DNA and restriction site-associated DNA sequencing (RAD-se
Data from: Mitogenomes and relatedness do not predict frequency of tool-use by sea otters
负责人:
关键词:
annotation;Sea otter;Enhydra lutris;mitogenome;diet specialization;tool
DOI:
doi:10.5061/dryad.6vf7j
摘要:
owed similar genetic patterns by sequencing mitogenomes of 43 otters and genotyping 154 otters at 38 microsatellite loci. There were six variable sites
Data from: Evolutionary history of endemic Sulawesi squirrels constructed from UCEs and mitogenomes sequenced from museum specimens
负责人:
关键词:
Species tree;Miocene-present;Sciuridae;Ancient introgression;ultraconserved elements;Rubrisciurus;Miocene-Holocene;Hyosciurus;Prosciurillus
DOI:
doi:10.5061/dryad.7v5p3
摘要:
mens. High throughput sequencing technology was used to generate whole mitochondrial genomes and a panel of nuclear ultraconserved elements providing a large genome-wide datase
Data from: Persistence of the mitochondrial lineage responsible for the Irish potato famine in extant New World Phytophthora infestans
负责人:
关键词:
plant pathogen pathogen pathogen evolution ancient DNA mitogenomes mitogenomics phylogenetics phylogenomics late blight potato blight
DOI:
doi:10.5061/dryad.4n3d1
摘要:
s surfacing in recent decades. Recently, complete P. infestans mitogenome sequences from 19th-century herbarium specimens were shown to belong to a unique
Data from: Conflicting phylogenomic signals reveal a pattern of reticulate evolution in a recent high-Andean diversification (Asteraceae: Astereae
负责人:
关键词:
reticulate evolution;Astereae;Asteraceae;ddRAD;hybridization;rapid diversification;Diplostephium;introgression;phylogenomics;genome skimming
DOI:
doi:10.5061/dryad.cn74h
摘要:
High-throughput sequencing is helping biologists to overcome the difficulties of inferring the phylogenies of recently diverged taxa. The present
Data from: Comparing the effectiveness of metagenomics and metabarcoding for diet analysis of a leaf-feeding monkey (Pygathrix nemaeus)
负责人:
关键词:
Environmental DNA;Pygathrix nemaeus;colobines;feces;shotgun sequencing
DOI:
doi:10.5061/dryad.99dj8
摘要:
mitochondrial genome and numerous intestinal parasite sequences in addition to generating data useful for characterizing the microbiome.
Data from: Mitochondrial phylogeny of notothenioids: a molecular approach to Antarctic fish evolution and biogeography
负责人:
关键词:
Notothenioidei;Antarctic fish;ribosomal RNA;mtDNA;Biogeography;phylogeny;Evolution
DOI:
doi:10.5061/dryad.540
摘要:
a remarkable diversification. In the present study a total of 798 base pairs, generated from partial sequencing of 16S and 12S mitochondrial ribosomal RNA ge

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