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Data from: Validating the power of mitochondrial metagenomics for community ecology and phylogenetics of complex assemblages
- 负责人:
- DOI:
- doi:10.5061/dryad.3rh21
- 摘要:
- of reads against three reference databases, including (i) a custom set of mitogenomes generated for 156 species (89% of species in the study); (ii
Data from: Long-range PCR allows sequencing of mitochondrial genomes from environmental DNA
- 负责人:
- DOI:
- doi:10.5061/dryad.q5gg0
- 摘要:
- . We validated our method in silico for 61 orders of Actinopterygii; we successfully sequenced mitogenomes in vitro from all six species in our mock community
Data from: Ancient mitochondrial gene transfer between fungi and the orchids
- 负责人:
- DOI:
- doi:10.5061/dryad.j133192
- 摘要:
- The mitochondrial genomes (mitogenomes) of plants are known to incorporate and accumulate DNA from intra- and extracellular donors. Des
Data from: Deep sequencing of mixed total DNA without barcodes allows efficient assembly of highly plastic ascidian mitochondrial genomes
- 负责人:
- Huchon, Dorothée
- 关键词:
- Mitochondrial genome Mitogenomics Next-generation sequencing Illumina Gene order Rearrangements Phylogeny Mixture models Genome assembly.
- DOI:
- doi:10.5061/dryad.ph920
- 摘要:
- five additional mitogenomes (Botrylloides aff. leachii, Halocynthia spinosa, Polycarpa mytiligera, Pyura gangelion, and Rhodosoma turcicum) with a nove
ng DNA barcodes or mitogenomes
- 负责人:
- DOI:
- doi:10.5061/dryad.r105t1f
- 摘要:
- and environmental biomonitoring. We resolve this challenge by combining shotgun sequencing, mapping to reference DNA barcodes or to mitogenomes, and three correction factors
Data from: Mitochondrial capture enriches mito-DNA 100 folds enabling PCR-free mitogenomics biodiversity analysis
- 负责人:
- DOI:
- doi:10.5061/dryad.19nf6
- 摘要:
- impediment of such a method is the lack of appropriate mitochondrial DNA enrichment ways. Because mitochondrial genomes (mitogenomes) make up only a sma
Data from: The mitogenome of freshwater loach Homatula laxiclathra (Teleostei: Nemacheilidae) with phylogenetic analysis of Nemacheilidae
- 负责人:
- DOI:
- doi:10.5061/dryad.nvx0k6dnz
- 摘要:
- y contribute to understand a true phylogeny with large-scale taxonomic samplings and grasp the evolution of fish mitogenomes.
Data from: Shotgun mitogenomics across body size classes in a local assemblage of tropical Diptera: phylogeny, species diversity and mito
- 负责人:
- DOI:
- doi:10.5061/dryad.nm948
- 摘要:
- of contigs was through phylogenetic analysis together with 56 reference mitogenomes, which placed most of the Bornean community into seven clades of sma
Data from: Persistence of the mitochondrial lineage responsible for the Irish potato famine in extant New World Phytophthora infestans
- 负责人:
- 关键词:
- mitogenomes plant pathogen pathogen pathogen evolution ancient DNA mitogenomics phylogenetics phylogenomics late blight potato blight
- DOI:
- doi:10.5061/dryad.4n3d1
- 摘要:
- lineage (HERB-1) predicted to be rare or extinct in modern times. We report 44 additional P. infestans mitogenomes: four from 19th-century Europe, thr
Data from: Ultraconserved elements sequencing as a low-cost source of complete mitochondrial genomes and microsatellite markers in non-model amniotes
- 负责人:
- DOI:
- doi:10.5061/dryad.33656
- 摘要:
- of microsatellite loci and assembly of complete mitogenomes is exemplified here using three species of Poospiza warbling finches from southern and southeastern Brazil