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Data from: Optimization of the genotyping-by-sequencing strategy for population genomic analysis in conifers
负责人:
关键词:
genotyping-by-sequencing;sequencing depth;SNP validation;library prep parameters;conifer genome;Pinus
DOI:
doi:10.5061/dryad.39gc6
摘要:
Flexibility and low cost make genotyping-by-sequencing (GBS) an ideal tool for population genomic studies of nonmodel species. However, to utilize
Data from: Single-nucleotide polymorphism discovery and validation in high-density SNP array for genetic analysis in European white oaks
负责人:
关键词:
SNP detection;Quercus robur;Infinium;genotyping;oaks;cluster compression;Quercus petraea
DOI:
doi:10.5061/dryad.fd862
摘要:
An Illumina Infinium SNP genotyping array was constructed for European white oaks. Six individuals of Quercus petraea and Q. robur were considered
Data from: Assessing individual patterns of Echinococcus multilocularis infection in urban coyotes: non-invasive genetic sampling as epi
负责人:
关键词:
infection rate;prevalence;Echinococcus multilocularis;definitive host;individual infection;coyote;faecal genotyping;urban settings
DOI:
doi:10.5061/dryad.k22kg
摘要:
1. In epidemiological studies of wildlife parasites, faecal genotyping has been introduced to prevent bias in estimates of parasite prevalence from
Data from: Identification of multiple QTL hotspots in sockeye salmon (Oncorhynchus nerka) using genotyping-by-sequencing and a dense linkage map
负责人:
关键词:
quantitative genetics;sockeye salmon;Mendelian inheritance;Thermotolerance;Size;quantitative trait loci;genomics and gene mapping;linkage map
DOI:
doi:10.5061/dryad.5n0v4
摘要:
in local adaptation and speciation. Here, we used genotyping-by-sequencing and a combination of previously published and newly generated data to construct sex-specific
Data from: The Mouse Universal Genotyping Array: from substrains to subspecies
负责人:
关键词:
Mus musculus
DOI:
doi:10.5061/dryad.689d2
摘要:
Genotyping microarrays are an important resource for genetic mapping, population genetics, and monitoring of the genetic integrity of laboratory
Data from: Characterizing the physical and genetic structure of the lodgepole pine × jack pine hybrid zone: mosaic structure and differential
负责人:
关键词:
hybrid zone;Pinus contorta;Pinus banksiana;environmental modeling;lodgepole pine;jack pine
DOI:
doi:10.5061/dryad.456q26k3
摘要:
ter knowledge of this zone is relevant, given the recent host expansion of mountain pine beetle into jack pine. We characterized the zone by genotyping 1998
Data from: Geographically-stratified HIV-1 group M pol subtype and circulating recombinant form sequences
负责人:
关键词:
HIV-1;GenBank Search;molecular epidemiology;Subtyping;pol Sequences
DOI:
doi:10.5061/dryad.56j2n
摘要:
Accurate classification of HIV-1 group M lineages, henceforth referred to as subtyping, is essential for understanding global HIV-1
Data from: Mapping of two suppressors of OVATE (sov) loci in tomato
负责人:
关键词:
Solanum lycopersicum
DOI:
doi:10.5061/dryad.st020
摘要:
d a Bulk Segregant Analysis approach and genotyped the extreme classes using a high-throughput genotyping platform, the SolCAP Infinium Assay. The analyses revealed segregation
Data from: 2b-RAD genotyping for population genomic studies of Chagas disease vectors: Rhodnius ecuadoriensis in Ecuador
负责人:
关键词:
Vector control;population genomics;Chagas disease;Rhodnius ecuadoriensis;2b-RAD geotyping;Next Generation Sequencing
DOI:
doi:10.5061/dryad.02bf1
摘要:
is a key consideration for vector control. Here we assess the effectiveness of three different 2b restriction site-associated DNA (2b-RAD) genotyping
Data from: Genotyping-in-Thousands by sequencing (GT-seq) panel development and application to minimally-invasive DNA samples to support studies
负责人:
关键词:
conservation genetics;Reptiles;Non-invasive sampling;Crotalus oreganus;targeted amplicon sequencing;SNP panel;molecular ecology;RAD-seq;Wildlife Management
DOI:
doi:10.5061/dryad.vr300p0
摘要:
for harnessing MPS. Here, we test the ability for Genotyping-in-Thousands by sequencing (GT-seq), a multiplex amplicon sequencing approach, to effectively genotype

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