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Data from: Aligner optimization increases accuracy and decreases compute times in multi-species sequence data
负责人:
关键词:
Plasmodium falciparum;alignments;Brugia malayi;Wolbachia;metagenomics;bioinformatics;genomics;Homo Sapiens;parasite genomics;dual species RNASeq;microbial genomics
DOI:
doi:10.5061/dryad.m1m0p
摘要:
As sequencing technologies have evolved, the tools to analyze these sequences have made similar advances. However, for multi-species samples
Data from: Discovery and evaluation of candidate sex-determining genes and xenobiotics in the gonads of lake sturgeon (Acipenser fulvescens)
负责人:
关键词:
Acipenser fulvescens;polyploidy;Trichomonas;transcriptome;Pyrosequencing 454;Schistosoma
DOI:
doi:10.5061/dryad.q0740kp8
摘要:
(Acipenser fulvescens). Using 454 pyrosequencing of transcribed genes, we produced more than 125 MB of sequence data from 473,577 high-quality sequencing reads. Sequences
Data from: ITS1: a DNA barcode better than ITS2 in eukaryotes?
负责人:
关键词:
DOI:
doi:10.5061/dryad.n56t9
摘要:
three aspects: PCR amplification, DNA sequencing and species discrimination, in terms of the presence of DNA barcoding gaps, species discrimination efficienc
Data from: Cost-efficient high throughput capture of museum arthropod specimen DNA using PCR-generated baits
负责人:
关键词:
Miridae;insects;host plant;Phylinae;phylogeny
DOI:
doi:10.5061/dryad.8004512
摘要:
h as arthropods. Next generation sequencing techniques allow for sequencing of short DNA fragments contained in preserved specimens >20 years old, but approaches
Data from: DNA and RNA-sequence based GWAS highlights membrane-transport genes as key modulators of milk lactose content
负责人:
Lopdell, Thomas
关键词:
QTL mapping GWAS milk lactose RNA sequencing genome sequencing
DOI:
doi:10.5061/dryad.vv469
摘要:
by the presence of co-locating, co-segregating eQTL discovered using mammary RNA sequence data representing a population of 357 lactating cows. Pathway analysis
Data from: Extreme heterogeneity of influenza virus infection in single cells
负责人:
关键词:
influenza virus;single-cell mRNA sequencing
DOI:
doi:10.5061/dryad.qp0t3
摘要:
. Here we use single-cell mRNA sequencing to examine the transcriptional consequences of influenza virus infection. We find extremely wide cell-to-cell
Data from: Sticky genomes: using NGS evidence to test hybrid speciation hypotheses
负责人:
关键词:
hybrid speciation;polyploidy;Acanthoxyla geisovii;Holocene;Evolution;Clitarchus hookeri;Stick insect;Hybridisation
DOI:
doi:10.5061/dryad.h5g60
摘要:
mRNA and sequencing cDNA to examine expressed allelic diversity. This allowed us to test hybrid-progenitor relationships among non-model organisms
Data from: Whole transcriptome RNA-Seq analysis of breast cancer recurrence risk using formalin-fixed paraffin-embedded tumor tissue
负责人:
关键词:
RNA-seq;Next Generation Sequencing;transcriptome;Breast Cancer;Homo Sapiens
DOI:
doi:10.5061/dryad.q760h
摘要:
eviously discovered using DNA microarrays in a separate cohort of patients, evidence that this RNA-Seq technology has sufficient precision and se
Data from: Small RNA sequencing reveals a novel tsRNA-26576 mediating tumorigenesis of breast cancer
负责人:
关键词:
DOI:
doi:10.5061/dryad.fv278qs
摘要:
s) were evaluated using small RNA sequencing. And then, RT-PCR was used to detected the tsRNA-26576 expression level in breast cancer patients. Result

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