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Data from: Assessing combinability of phylogenomic data using Bayes Factors
负责人:
关键词:
Concatenation;marginal likelihood;Bayes factor;Bayes Factor calibration;phylogenetic dissonance;phylogenomics
DOI:
doi:10.5061/dryad.gt81779
摘要:
With the rapid reduction in sequencing costs of high-throughput genomic data, it has become commonplace to use hundreds of genes to infer phyloge
Data from: Repurposed transcriptomic data facilitate discovery of innate immunity Toll-Like Receptor (TLR) genes across Lophotrochozoa
负责人:
关键词:
Toll TLR Toll-like receptor data mining
DOI:
doi:10.5061/dryad.0318j
摘要:
The growing volume of genomic data from across life represents opportunities for deriving valuable biological information from data that wer
Data from: Targeted capture and resequencing of 1040 genes reveal environmentally driven functional variation in gray wolves
负责人:
关键词:
Genomics\/Proteomics;climate;Natural Selection and Contemporary Evolution;Capture Array;Mammals;Holocene;Canis lupus;Adaptation
DOI:
doi:10.5061/dryad.8g0s3
摘要:
single nucleotide polymorphisms (SNPs) array-based genome scans is uncertain. We previously performed a SNP array-based genome scan to identify candidate genes under selection in si
Data from: Candidate gene-environment interactions and their relationships with timing of breeding in a wild bird population
负责人:
关键词:
incubation duration;ADCYAP1;CREB1;candidate gene;GxE;laying date;Tachycineta bicolor;CLOCK;NPAS2;Tree swallow
DOI:
doi:10.5061/dryad.f7t25
摘要:
le, short tandem repeat polymorphism at four candidate genes (CLOCK, NPAS2, ADCYAP1, and CREB1) has been linked to variation in phenological traits such as laying dat
Data from: Scrimer: designing primers from transcriptome data
负责人:
关键词:
Luscinia megarhynchos;transcriptome;Luscinia luscinia;454 FLX Titanium
DOI:
doi:10.5061/dryad.2p4t3
摘要:
e is no publicly available software for the automated design of suitable PCR and genotyping primers from next-generation sequence data. Here we present a pipe
Data from: Combining phylogenomic and supermatrix approaches, and a time-calibrated phylogeny for squamate reptiles (lizards and snakes) based on 52
负责人:
关键词:
Reptiles;missing data;Mesozoic;phylogenomic;lizards;Squamata;phylogeny;chronogram;Cenozoic;Supermatrix;Snakes
DOI:
doi:10.5061/dryad.tv055
摘要:
ently published datasets, one based on 44 genes for 161 species, and one based on 12 genes for 4161 species. The likelihood-based tree from the combined
FAIRsharing record for: DisGeNET: a knowledge base for disease genomics;;DisGeNET
负责人:
关键词:
Biomedical Science Human Genetics Life Science Genetic polymorphism Disease Gene Mutation
DOI:
doi:10.25504/fairsharing.fssydn
摘要:
involved in human diseases. DisGeNET integrates data from expert curated repositories, GWAS catalogues, animal models, and the scientific literature
Data from: Evaluating population genomic candidate genes underlying flowering time in Arabidopsis thaliana using T-DNA insertion lines
负责人:
关键词:
Arabidopsis thaliana;adaptation Subject area: Quantitative genetics and Mendelian inheritance;flowering time;tDNA;population genomics;T-DNA;genomics and gene mapping
DOI:
doi:10.5061/dryad.k5r20q0
摘要:
of genomic scans in identifying novel lists of loci potentially underlying adaptation, few studies proceed to validate the function of these candidate genes
Data from: Decisive datasets in phylogenomics: lessons from studies on the phylogenetic relationships of primarily wingless insects
负责人:
关键词:
Protura;Ellipura;Nonoculata;Diplura;conflicting hypotheses;Hexapoda;Entognatha;Collembola;ESTs;Likelihood quartet mapping;missing data;phylogenomics
DOI:
doi:10.5061/dryad.mk8p7
摘要:
e is correlated with neither functional class assignment of these genes, nor with model misspecification due to unpartitioned analyses. The herein analyzed data

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