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Data from: Convergent local adaptation to climate in distantly related conifers
负责人:
关键词:
Picea glauca;local adaptation;population genomics;Pinus contorta;convergent evolution;Picea engelmannii;2005-2015
DOI:
doi:10.5061/dryad.0t407
摘要:
at the genome scale. We performed a population genomic study of convergent local adaptation among two distantly related species, lodge
Data from: Selection signature analysis reveals genes associated with tail type in Chinese indigenous sheep
负责人:
关键词:
fat tail selection signature sheep animal genetics
DOI:
doi:10.5061/dryad.g7rk5
摘要:
approaches in fat- and thin-tailed sheep with available 50K SNP genotype data. These two methods found 6.24 Mb of overlapped regions and 43 genes that ma
Data from: Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its application
负责人:
关键词:
Species tree;cytonuclear discordance;Target Enrichment;low-copy nuclear genes;Oxalis;genome skimming
DOI:
doi:10.5061/dryad.dn08t
摘要:
organisms, we created an automated and interactive script to select hundreds of LCN loci by a comparison between transcriptome and genome skim data. We used our script
Data from: Phylogenomic analysis of BAC-end sequence libraries in Oryza (Poaceae)
负责人:
Cranston, Karen A.
关键词:
phylogenomics rice Oryza BAC-end sequencing missing data gene trees species trees
DOI:
doi:10.5061/dryad.1611
摘要:
sampling across many genes allows for both large concatenated data sets to improve genome-scale phylogenetic resolution and also for independent analysis
Data from: Simulated data for genomic selection and genome-wide association studies using a combination of coalescent and gene drop methods
负责人:
关键词:
genome-wide association studies (GWAS) shared data resources GenPred simulation method quantitative trait loci (QTL) pedigrees
DOI:
doi:10.5061/dryad.nm290
摘要:
An approach is described for simulating data sequence, genotype, and phenotype data to study genomic selection and genome
Data from: Analysis of gene expression in rheumatoid arthritis and related conditions offers insights into sex-bias, gene biotype
负责人:
关键词:
RNA-seq;osteoarthritis;arthralgia;Homo Sapiens;sex-bias;Rheumatoid Arthritis;gene expression
DOI:
doi:10.5061/dryad.315v28r
摘要:
and arthralgia. We show comprehensive overviews of this data collection and give new insights specifically on gene expression in the early stage, into sex
Data from: Finding stories in noise: mitochondrial portraits from RAD data
负责人:
关键词:
genotyping-by-sequencing;Labeobarbus natalensis;Genomics\/Proteomics;polyploidy;mitochondrial genome;hybridization;Labeobarbus aeneus;Labeobarbus kimberleyensis;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.75fh336
摘要:
of mitochondrial sequences. Most researchers using this approach appear to be unaware that many Single Nucleotide Polymorphisms (SNPs) identified from genome-wide sequence data
Data from: Phylotranscriptomic analysis and genome evolution of the Cypripedioideae (Orchidaceae)
负责人:
关键词:
polyploidy;Orchidaceae;monocot;genome evolution;Cypripedioideae;genome size;phylogenomics;phylotranscriptomics
DOI:
doi:10.5061/dryad.5gd00
摘要:
existing RNA-seq data to infer a multi-locus nuclear phylogeny of the Cypripedioideae and to determine if a whole genome duplication event (WGD) correlated
Data from: Whole genome sequence resource of Indian Zaprionus indianus
负责人:
关键词:
agriculture pest;Zaprionus indianus;Whole genome sequence;invasive species;Illumina
DOI:
doi:10.5061/dryad.3393k
摘要:
e. The sequences were generated on an Illumina platform and reads and whole genome sequence submitted to NCBI to the SRA and BioProject databases respective
Data from: Genotyping-by-sequencing for Populus population genomics: an assessment of genome sampling patterns and filtering approaches
负责人:
关键词:
genotyping-by-sequencing;data filtering;Populus tremuloides;population genomics;sampling bias;Populus trichocarpa;ApeKI
DOI:
doi:10.5061/dryad.2cs4g
摘要:
ious population-level data filtering strategies in a genotyping-by-sequencing (GBS) protocol. We focus on data from two species of Populus, because this genus ha

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