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Data from: Inferring heterogeneous evolutionary processes through time: from sequence substitution to phylogeography
- 负责人：
- DOI：
- doi:10.5061/dryad.qp747
- 摘要：
- convenience, this assumption sacrifices biological realism and offers little opportunity to uncover the temporal dynamics in evolutionary histories. Her
Data from: ggtree: an R package for visualization and annotation of phylogenetic trees with their covariates and other associated data
- 负责人：
- DOI：
- doi:10.5061/dryad.v15v0
- 摘要：
- of beast, epa, hyphy, paml, phylodog, pplacer, r8s, raxml and revbayes software, and allows using these data to annotate the tree. The package allows
Data from: Genealogical working distributions for Bayesian model testing with phylogenetic uncertainty
- 负责人：
- DOI：
- doi:10.5061/dryad.8tm76
- 摘要：
- when using PS and SS, while still retrieving the correct marginal likelihood using both GSS approaches. The methods used in this paper are available in BEAST
Data from: Relaxed phylogenetics and the Palaeoptera problem: resolving deep ancestral splits in the insect phylogeny
- 负责人：
- DOI：
- doi:10.5061/dryad.7d2g2
- 摘要：
- orders) remains very much unresolved. Indeed, previous studies have obtained strong apparent support for each of the three possible branching patterns. Her
Data from: Testing the impact of calibration on molecular divergence times using a fossil-rich group: the case of Nothofagus (Fagales)
- 负责人：
- DOI：
- doi:10.5061/dryad.qq106tm4
- 摘要：
- of Fagales. Molecular dating analyses were conducted for each scenario using maximum likelihood (RAxML + r8s) and Bayesian (BEAST) approaches on sequence data
Data from: Diversity and disparity through time in the adaptive radiation of Antarctic notothenioid fishes
- 负责人：
- DOI：
- doi:10.5061/dryad.5jt5j
- 摘要：
- to slow down after an initial phase of rapid adaptation to vacant ecological niches, followed by speciation. Such ‘early bursts’ of diversification
Data from: Utilizing RADseq data for phylogenetic analysis of challenging taxonomic groups: a case-study in Carex sect. Racemosae
- 负责人：
- 关键词：
- Glaciation;Next-generation sequencing;SVDQuartets;Cyperaceae;Miocene to Holocene;Carex;Pleistocene
- DOI：
- doi:10.5061/dryad.4b8j7
- 摘要：
- e analyzed with *BEAST, and SNP data from RADseq loci were analyzed as a concatenated data set using maximum likelihood and as independent loci usi
Data from: Molecular phylogeny of the burying beetles (Coleoptera: Silphidae: Nicrophorinae)
- 负责人：
- DOI：
- doi:10.5061/dryad.mr221
- 摘要：
- with four separate transitions to the New World and four reverse colonizations of the Old World from the New. Divergence dating from analysis with BEAST indic
Data from: A preliminary framework for DNA barcoding, incorporating the multispecies coalescent
- 负责人：
- DOI：
- doi:10.5061/dryad.st467
- 摘要：
- programs (e.g., BEST, BPP, *BEAST, MrBayes v. 3.2, STEM, and COAL). Although the general mixed Yule coalescent (GMYC) approach has also been developed
Data from: Bayesian morphological clock methods resurrect placoderm monophyly and reveal rapid early evolution in jawed vertebrates
- 负责人：
- DOI：
- doi:10.5061/dryad.v30f1
- 摘要：
- The phylogeny of early gnathostomes provides an important framework for understanding one of the most significant evolutionary events, the origin
