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Data from: Metatranscriptomics of the human oral microbiome during health and disease
负责人:
关键词:
RNA-seq;infectious disease;metatranscriptomics;metagenomics;periodontitis;microbiome
DOI:
doi:10.5061/dryad.d41v4
摘要:
-associated microbial communities undergo conserved changes in metabolism during disease. Here we used patient-matched healthy and diseased samples
Data from: Convergence of gut microbiomes in myrmecophagous mammals
负责人:
关键词:
Environmental DNA;bacteria;Bioinfomatics\/Phyloinfomatics;Community Ecology;Mammals
DOI:
doi:10.5061/dryad.390ng
摘要:
of convergence in gut microbiome composition over evolutionary timescales. This study sets the scene for future metagenomic studies aiming at evaluating potential
Data from: Blood transcriptomes reveal novel parasitic zoonoses circulating in Madagascar's lemurs
负责人:
关键词:
metagenomics disease surveillance next-generation One Health wildlife zoonotic
DOI:
doi:10.5061/dryad.44p35
摘要:
, and the island of Madagascar serves as a natural laboratory for conducting these studies. Rapid habitat degradation and climate change on the island ar
Data from: Aligner optimization increases accuracy and decreases compute times in multi-species sequence data
负责人:
关键词:
Plasmodium falciparum;alignments;Brugia malayi;Wolbachia;metagenomics;bioinformatics;genomics;Homo Sapiens;parasite genomics;dual species RNASeq;microbial genomics
DOI:
doi:10.5061/dryad.m1m0p
摘要:
the computational time, while maximizing specificity. Similar results were found for simulated sequence reads from a mock metagenomic data set. We found sim
The data for: Genomic resources and draft reference assemblies of the human and porcine scabies mites, Sarcoptes scabiei var hominis and var suis
负责人:
关键词:
Genomic
DOI:
doi:10.5524/100198
摘要:
e derived from pools of thousands of mites and are metagenomic, including host and microbiome DNA. We performed cleaning and de novo assembly and present
Data from: Deciphering conjugative plasmid permissiveness dynamics in wastewater microbiomes
负责人:
关键词:
metagenomics;Niche Modelling;Microbial Biology;molecular evolution;Bioinfomatics\/Phyloinfomatics;Community Ecology
DOI:
doi:10.5061/dryad.636b0
摘要:
ng the broad host-range IncP-1 conjugative plasmid, pKJK5. A thorough molecular approach coupling metagenomes to 16S rRNA DNA/cDNA amplicon sequencing
Data from: Assessing vertebrate biodiversity in a kelp forest ecosystem using environmental DNA
负责人:
关键词:
Metagenomics Environmental DNA Community Ecology DNA Barcoding Fish Marine fishes and mammals
DOI:
doi:10.5061/dryad.nf578
摘要:
-intensive. Metabarcoding of environmental DNA (eDNA) offers a new means to assess biodiversity and on much larger scales, but adoption of this approach
The Genome Of The Tardigrade Hypsibius Dujardini
负责人:
关键词:
metagenomics tardigrade blobtools contamination horizontal gene transfer hypsibius dujardini
DOI:
doi:10.5281/zenodo.45162
摘要:
mination with approaches derived from metagenomics, which we show are very appropriate for meiofaunal species. We conclude that HGT into H. dujardini accounts
Data from: Succession and dynamics of Pristionchus nematodes and their microbiome during decomposition of Oryctes beetles on La Réunion Island
负责人:
Sommer, Ralf J.
关键词:
metagenome microbiome
DOI:
doi:10.5061/dryad.3c153
摘要:
rhinoceros beetle Oryctes borbonicus on La Réunion Island. We show that Pristionchus pacificus exits the arrested dauer stage seven days after the beetles′ deaths
Data from: From feces to data: a metabarcoding method for analyzing consumed and available prey in a bird-insect food web
负责人:
关键词:
dietary ecology;Anthropocene;Poecile montanus;metagenomics;frass;DNA Barcoding;Lepidoptera;insectivorous birds;Cyanistes caeruleus;Parus major;Fecal DNA;Poecile cinctus
DOI:
doi:10.5061/dryad.4f1n785
摘要:
le. In this study, we applied DNA metabarcoding to analyze the diet of 4 bird species (willow tits Poecile montanus, Siberian tits Poecile cinctus, great tits

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