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Data from: Metabarcoding and mitochondrial metagenomics of endogean arthropods to unveil the mesofauna of the soil
- 负责人：
- DOI：
- doi:10.5061/dryad.5t5s1
- 摘要：
- of arthropod communities from these bulk DNA extractions using cox1 metabarcoding and shotgun metagenomic sequencing on the MiSeq Illumina platform. The FBF protocol
Data from: EPA-ng: massively parallel evolutionary placement of genetic sequences
- 负责人：
- DOI：
- doi:10.5061/dryad.kb505nc
- 摘要：
- in metagenetics, which focuses on taxonomic identification of sequences obtained from diverse microbial environments. Phylogenetic placement methods determine
Data from: Detection and decay rates of prey and prey symbionts in the gut of a predator through metagenomics
- 负责人：
- DOI：
- doi:10.5061/dryad.n6278
- 摘要：
- nuclear DNA and mtDNA decayed at similar rates (0.281 and 0.11 h?1 respectively), and the detectability periods were 32.7 and 23.1 h. Metagenomic sequencing als
Data from: Deep mitochondrial origin outside the sampled alphaproteobacteria
- 负责人：
- DOI：
- doi:10.5061/dryad.068d0d0
- 摘要：
- evolved from a free-living group. Here we re-evaluate the phylogenetic placement of mitochondria. We employ genome-resolved binning of oceanic metagenome
Data from: Distribution patterns of microbial communities in ultramafic landscape: a metagenetic approach highlights the strong relationships bet
- 负责人：
- DOI：
- doi:10.5061/dryad.4fb1m
- 摘要：
- r distributional patterns and environmental traits. The structure of microorganism communities in the Koniambo massif, New Caledonia, was investigated using a metage
Data from: A new plant virus discovered by immunocapture of double stranded RNA; assessment of a novel approach for viral metagenomics studies
- 负责人：
- Blouin, Arnaud G.
- 关键词：
- Metagenomics antibodies dsRNA NGS virus
- DOI：
- doi:10.5061/dryad.0bg04
- 摘要：
- and sequenced by next-generation sequencing. In our study, we have selected three distinct plant hosts: Māori potato (Solanum tuberosum), rengarenga (Arthropodium
Data from: Characterizing DNA preservation in degraded specimens of Amara alpina (Carabidae: Coleoptera)
- 负责人：
- DOI：
- doi:10.5061/dryad.0179t
- 摘要：
- e significantly longer than those of nuclear DNA in both museum and ancient specimens. Metagenomic characterisation of extracted DNA demonstrated tha
Data from: Metagenomic sequencing detects respiratory pathogens in hematopoietic cellular transplant patients
- 负责人：
- DOI：
- doi:10.5061/dryad.800tj
- 摘要：
- the utility of metagenomic next generation sequencing (mNGS) of bronchoalveolar lavage (BAL) to detect microbial pathogens in HCT patients with acute
Data from: APPLES: Scalable distance-based phylogenetic placement with or without alignments
- 负责人：
- DOI：
- doi:10.5061/dryad.78nf7dq
- 摘要：
- nies in a scalable fashion and can help identify unknown query samples using (meta-)barcoding, skimming, or metagenomic data. Maximum likelihood (ML) met
Data from: Genome reduction and microbe-host interactions drive adaptation of a sulfur-oxidizing bacterium associated with a cold seep sponge
- 负责人：
- 关键词：
- DOI：
- doi:10.5061/dryad.8ht6v
- 摘要：
- and physiology of thioautotrophic symbionts in deep-sea sponges are largely unknown. Using a tailored “differential coverage binning” method on 22-Gb metagenomic
