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Data from: Resolving neutral and deterministic contributions to genomic structure in Syntrichia ruralis (Bryophyta, Pottiaceae) informs propagule
负责人:
关键词:
bryophyte;Next-generation sequencing;Syntrichia ruralis;RADseq;biological soil crust;biocrust;Holocene;phylogeography;Procrustes;Pleistocene
DOI:
doi:10.5061/dryad.18bv1
摘要:
Syntrichia ruralis is a cosmopolitan moss that occupies steep environmental gradients. In arid to semi-arid regions of the world it is a key
Data from: Unforeseen consequences of excluding missing data from next-generation sequences: simulation study of RAD sequences
负责人:
关键词:
RADtags;species delimitation;phylogenetic;Next-generation sequencing;RADseq;phylogeography
DOI:
doi:10.5061/dryad.jf361
摘要:
simulations, focusing specifically on RAD sequences, to highlight some of the unforeseen consequence of excluding missing data from next-generation se
Data from: Rapid generation of ecologically relevant behavioural novelty in experimental cichlid hybrids
负责人:
关键词:
cichlid radiations;East Africa
DOI:
doi:10.5061/dryad.280gb5mn7
摘要:
the F2 hybrids are transgressive in both morphology and behaviour related to sand sifting. We then performed a quantitative trait loci (QTL) analysis using RADseq
Data from: How “simple” methodological decisions affect interpretation of population structure based on reduced representation library DNA se
负责人:
关键词:
nextRAD;Coregonus clupeaformis;Stacks;RADseq;bioinformatics
DOI:
doi:10.5061/dryad.4vr8kp3
摘要:
Reduced representation (RRL) sequencing approaches (e.g., RADSeq, genotyping by sequencing) require decisions about how much to invest in genome
Data from: Deeply divergent sympatric mitochondrial lineages of the earthworm Lumbricus rubellus are not reproductively isolated
负责人:
关键词:
species delimitation;Lumbricus rubellus;mtDNA;earthworm;RADseq;soil diversity;cryptic species
DOI:
doi:10.5061/dryad.8070m
摘要:
ntial for the interpretation and the design of ecotoxicological projects. In this study, we used genome-wide RADseq data to assess the reproductive isolation of the divergent
Data from: Genomic insights into the vulnerability of sympatric whitefish species flocks
负责人:
关键词:
Coregonus heglingus;ecological speciation;Coregonus zuerichensis;speciation reversal;RADseq;species sorting;Coregonus duplex;Coregonus spp
DOI:
doi:10.5061/dryad.gp25h48
摘要:
ng restriction-site associated DNA sequencing (RADseq). Our analysis suggests that in each of the two lakes the population of a different, but ecologically sim
Data from: Evaluating hybridization capture with RAD probes as a tool for museum genomics with historical bird specimens
负责人:
关键词:
sequence capture;Anthropocene;hyRAD;RADseq;ancient DNA;Syma torotoro;museum genomics
DOI:
doi:10.5061/dryad.r7q86
摘要:
-associated DNA probes (hyRAD) is a recently developed method for population genomics with museum specimens. The hyRAD method employs fragments produced
Data from: Phylogenomic signatures of ancient introgression in a rogue lineage of darters (Teleostei: Percidae)
负责人:
关键词:
Crystallaria;RADseq;Ammocrypta;Etheostoma;Perca;Ancient hybridization;Darters;Percina;Sander;phylogenomics;Nothonotus;Etheostomatinae;phylogenetic networks;Allohistium
DOI:
doi:10.5061/dryad.1c9g5mm
摘要:
of Allohistium, through analyses of ~30,000 RADseq loci sampled from 112 species. Our phylogenetic inferences are based on traditional approaches in combination
Data from: Resolving the Northern Hemisphere source region for the long-distance dispersal event that gave rise to the South American endemic dung
负责人:
关键词:
Splachnaceae;Amphitropical;RADseq;Bryopsida;long-distance dispersal;bryophyte;lichen;Miocene - Pleistocene
DOI:
doi:10.5061/dryad.2cs4v
摘要:
within the bipolar lineage of Tetraplodon, which includes T. fuegianus, we analyzed thousands of Restriction-site Associated DNA (RADseq) loci
Data from: Museum specimens provide reliable SNP data for population genomic analysis of a widely distributed but threatened cockatoo species
负责人:
关键词:
DArTseq;conservation genomics;population genomics;Museum specimens;Calyptorhynchus banksii
DOI:
doi:10.5061/dryad.rb15131
摘要:
l inferences of genetic diversity. This study demonstrates the utility of a RADseq-based method to produce reliable genome-wide SNP data from trad

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