Data from: Genomic footprints of adaptation in a cooperatively breeding tropical bird across a vegetation gradient

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关键词：

isolation by distance;selection;isolation by environment;genome scan;genotype-environment-phenotype associations;Yucatan jay;adaptive genetic variation;Cyanocorax yucatanicus

DOI：

doi:10.5061/dryad.2t6t8

摘要：

by isolation by distance (IBD) and/or isolation by environment (IBE). Here, we used variation in ~1,600 high-quality SNPs derived from paired-end sequencing of double-digest

Data from: Short tree, long tree, right tree, wrong tree: new acquisition bias corrections for inferring SNP phylogenies

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关键词：

maximum likelihood;reconstituted DNA;Phrynosomatidae;ddRADseq;conditional likelihood;Phrynosoma

DOI：

doi:10.5061/dryad.t9r3g

摘要：

of collection. Restriction site associated DNA sequencing (RADseq) methods are becoming increasingly popular for SNP data collection, but an asses

Data from: Parallel evolution and adaptation to environmental factors in a marine flatfish: implications for fisheries and aquaculture manage

负责人：

Martínez, Paulino

关键词：

RAD sequencing population structure adaptive variation Conservation Genetics

DOI：

doi:10.5061/dryad.pq3376q

摘要：

755 Single Nucleotide Polymorphism discovered and genotyped by Double Digest RAD Sequencing. The species was structured into four main regions

Data from: Genomic characterization of sex-identification markers in Sebastes carnatus and Sebastes chrysomelas rockfishes

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关键词：

Genomics\/Proteomics;Sebastes chrysomelas;Evolution of Sex;Sebastes carnatus;molecular evolution;Fish;Bioinfomatics\/Phyloinfomatics

DOI：

doi:10.5061/dryad.3c8s8

摘要：

, double digest restriction site – associated DNA sequencing (ddRAD-seq) of genomic DNA from 40 sexed individuals of both species was performed. Loci wer

Data from: Temporal genetic patterns of diversity and structure evidence sweepstakes in reproductive success of a spiny lobster

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关键词：

genetic diversity;Jasus edwardsii;population structure;lobster;post-settlement selection;chaotic genetic patchiness

DOI：

doi:10.5061/dryad.6gh40

摘要：

rly benthic life. Here we used double digest restriction-site associated DNA sequencing (ddRADseq) to investigate chaotic genetic patchiness and post-se

Data from: Rapid divergence of mussel populations despite incomplete barriers to dispersal

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关键词：

Isolation-by-distance;population genomics;ddRAD-seq;marine biodiversity;Isolation-by-Environment;Coral Triangle;Brachidontes sp.

DOI：

doi:10.5061/dryad.1r89hq8

摘要：

-digest Restriction-site Associated DNA sequencing), we show strong genetic structuring across populations (range FST: 0.07 – 0.24), and find limited

Data from: Introgression between invasive and native blue mussels (genus Mytilus) in the central California hybrid zone.

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关键词：

conservation genetics;INTROGRESS;structure;catalog;Mytilus;assignment test;populations.pl;hybridization;Stacks;introgression;genomic cline;invasive species;introgression;Principal components analysis;hybrid index;NewHybrids;SNPs;Mollusca;\adegenet\

DOI：

doi:10.5061/dryad.53d34

摘要：

rection of introgression with the native Mytilus trossulus in a hybrid zone in central California. We use double-digest restriction-site-associated DNA sequencing (ddRADse

Data from: Genomic analysis of a cardinalfish with larval homing potential reveals genetic admixture in the Okinawa Islands

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关键词：

population genetics;Siphamia tubifer;bioluminescent;Siphamia tubifer<\/i>;Fish;RAD-seq

DOI：

doi:10.5061/dryad.5n882

摘要：

, and the development of restriction site-associated sequencing (RAD-Seq) methods has made such studies of nonmodel organisms more accessible. We applied double-digest