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Data from: From environmental DNA sequences to ecological conclusions: how strong is the influence of methodological choices?
- 负责人:
- 关键词:
- DOI:
- doi:10.5061/dryad.0t39970
- 摘要:
- ps. Taxon: Vascular plants and Fungi. Methods: Using soil eDNA metabarcoding data for plants and fungi from twenty plots sampled along a 1000
Data from: Environmental metabarcodes for insects: in silico PCR reveals potential for taxonomic bias
- 负责人:
- DOI:
- doi:10.5061/dryad.dn45c
- 摘要:
- estimates of diversity, metabarcoding markers ideally possess appropriate taxonomic coverage to avoid PCR-amplification bias, as well as sufficient
Data from: Locality or habitat? Exploring predictors of biodiversity in Amazonia
- 负责人:
- DOI:
- doi:10.5061/dryad.4hv2b38
- 摘要:
- Amazonia is an environmentally heterogeneous and biologically megadiverse region, and its biodiversity varies considerably over space. Howeve
Data from: Tracking earthworm communities from soil DNA
- 负责人:
- Taberlet, Pierre
- DOI:
- doi:10.5061/dryad.3mv8v434
- 摘要:
- of a mustard solution. Such techniques are time-consuming and often difficult to apply. We showed that combining DNA metabarcoding and next generation sequencing
Data from: Next-generation freshwater bioassessment: eDNA metabarcoding with a conserved metazoan primer reveals species-rich and reservoir-specific
- 负责人:
- DOI:
- doi:10.5061/dryad.40hs5
- 摘要:
- is uncommon. Here, we test whether the evaluation of environmental DNA (eDNA) from water based on a simple protocol can be used for assessing biodi
Data from: Metabarcoding reveals environmental factors influencing spatio-temporal variation in pelagic micro-eukaryotes
- 负责人:
- DOI:
- doi:10.5061/dryad.442dv
- 摘要:
- variation, especially on the Shelf, which warrants further exploration. Metabarcoding revealed clear patterns in surface pelagic micro-eukaryote communities
Data from: A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application
- 负责人:
- 关键词:
- second generation sequencing DNA barcoding mini-barcode mitochondrial marker trophic interactions food web
- DOI:
- doi:10.5061/dryad.6gd51
- 摘要:
- of environmental samples. Identifying species from these samples relies on the ability to match sequences with reference barcodes for taxonomic identification. Unfortunat
Data from: Landscape-scale distribution patterns of earthworms inferred from soil DNA
- 负责人:
- DOI:
- doi:10.5061/dryad.27qf3
- 摘要:
- r large areas. Recently, environmental DNA-based approaches coupled with next-generation sequencing were developed to study soil biodiversity. Here, we optimized
Data from: Digging for DNA at depth: rapid universal metabarcoding surveys (RUMS) as a tool to detect coral reef biodiversity across a depth gradient
- 负责人:
- DOI:
- doi:10.5061/dryad.37qv5rd
- 摘要:
- to contribute to holistic ecosystem-based monitoring. In tandem, environmental DNA (eDNA) and next-generation sequencing metabarcoding methods provi
Data from: Quantifying uncertainty of taxonomic placement in DNA barcoding and metabarcoding
- 负责人:
- DOI:
- doi:10.5061/dryad.v2p68
- 摘要:
- . This allows the use of all the information known based on the taxonomic names. Taxonomic placement of DNA barcoding sequences is inherently proba