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Data from: From environmental DNA sequences to ecological conclusions: how strong is the influence of methodological choices?
负责人:
关键词:
DOI:
doi:10.5061/dryad.0t39970
摘要:
ps. Taxon: Vascular plants and Fungi. Methods: Using soil eDNA metabarcoding data for plants and fungi from twenty plots sampled along a 1000
Data from: Locality or habitat? Exploring predictors of biodiversity in Amazonia
负责人:
关键词:
Metabarcoding;Operational Taxonomic Units (OTUs);Biodiversity gradient
DOI:
doi:10.5061/dryad.4hv2b38
摘要:
Amazonia is an environmentally heterogeneous and biologically megadiverse region, and its biodiversity varies considerably over space. Howeve
Data from: Tracking earthworm communities from soil DNA
负责人:
Taberlet, Pierre
关键词:
Community Ecology DNA Barcoding Invertebrates Population Ecology DNA metabarcoding
DOI:
doi:10.5061/dryad.3mv8v434
摘要:
of a mustard solution. Such techniques are time-consuming and often difficult to apply. We showed that combining DNA metabarcoding and next generation sequencing
Data from: Next-generation freshwater bioassessment: eDNA metabarcoding with a conserved metazoan primer reveals species-rich and reservoir-specific
负责人:
关键词:
Metabarcoding;eDNA;freshwater bioassessment
DOI:
doi:10.5061/dryad.40hs5
摘要:
is uncommon. Here, we test whether the evaluation of environmental DNA (eDNA) from water based on a simple protocol can be used for assessing biodi
Data from: Metabarcoding reveals environmental factors influencing spatio-temporal variation in pelagic micro-eukaryotes
负责人:
关键词:
high-througput sequencing;Metabarcoding;diversity;pelagic;18S rRNA;Gult of Mexico;micro-eukaryote;Illumina
DOI:
doi:10.5061/dryad.442dv
摘要:
variation, especially on the Shelf, which warrants further exploration. Metabarcoding revealed clear patterns in surface pelagic micro-eukaryote communities
Data from: A new versatile primer set targeting a short fragment of the mitochondrial COI region for metabarcoding metazoan diversity: application
负责人:
关键词:
second generation sequencing DNA barcoding mini-barcode mitochondrial marker trophic interactions food web
DOI:
doi:10.5061/dryad.6gd51
摘要:
of environmental samples. Identifying species from these samples relies on the ability to match sequences with reference barcodes for taxonomic identification. Unfortunat
Data from: Landscape-scale distribution patterns of earthworms inferred from soil DNA
负责人:
关键词:
Environmental DNA;earthworm;Metabarcoding;Landscape;Spatial distribution;Land-use;Soil biodiversity;Holocene
DOI:
doi:10.5061/dryad.27qf3
摘要:
r large areas. Recently, environmental DNA-based approaches coupled with next-generation sequencing were developed to study soil biodiversity. Here, we optimized
Data from: Digging for DNA at depth: rapid universal metabarcoding surveys (RUMS) as a tool to detect coral reef biodiversity across a depth gradient
负责人:
关键词:
Environmental DNA;Demospongiae;Anthozoa;Environmental DNA;Next-generation sequencing;18S ribosomal DNA;Invertebrate;Demospongiae;Holocene;Marine
DOI:
doi:10.5061/dryad.37qv5rd
摘要:
to contribute to holistic ecosystem-based monitoring. In tandem, environmental DNA (eDNA) and next-generation sequencing metabarcoding methods provi
Data from: Quantifying uncertainty of taxonomic placement in DNA barcoding and metabarcoding
负责人:
关键词:
molecular species identification;Mammalia;bacteria;Mammals;Fungi;Insecta;DNA Barcoding;taxonomic placement;insects
DOI:
doi:10.5061/dryad.v2p68
摘要:
. This allows the use of all the information known based on the taxonomic names. Taxonomic placement of DNA barcoding sequences is inherently proba

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