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Data from: Benchmarking DNA metabarcoding for biodiversity-based monitoring and assessment
负责人:
关键词:
biotic indices;Illumina MiSeq;macroinvertebrates;COI barcodes;extracellular DNA;AMBI
DOI:
doi:10.5061/dryad.0sc0s
摘要:
and metabarcoding-based taxonomic inferences that validates this technique for environmental monitoring is still lacking. Here we compare taxonomic inferences
Data from: Molecular and pollen-based vegetation analysis in lake sediments from central Scandinavia
负责人:
关键词:
Environmental DNA;pollen;Boreal vegetation;Barcoding;Community Ecology;ancient DNA;Holocene;Ecological Genetics
DOI:
doi:10.5061/dryad.9n815
摘要:
ults. We conclude that metabarcoding from lake sediments provides a complementary, but not an alternative, tool to pollen analysis for investigating pas
Data from: Minimizing polymerase biases in metabarcoding
负责人:
关键词:
Environmental DNA;Metabarcoding;trnL P6 loop;Bias;soil;eDNA
DOI:
doi:10.5061/dryad.k129c
摘要:
DNA metabarcoding is an increasingly popular method to characterize and quantify biodiversity in environmental samples. Metabarcoding appro
Data from: How quantitative is metabarcoding: a meta-analytical approach
负责人:
关键词:
DOI:
doi:10.5061/dryad.085jj60
摘要:
Metabarcoding has been used in a range of ecological applications such as taxonomic assignment, dietary analysis, and the anal
Data from: Next-generation monitoring of aquatic biodiversity using environmental DNA metabarcoding
负责人:
关键词:
Batrachia;Fish;detection probability;wildlife management.;eDNA;amphibian;Monitoring;Teleostei
DOI:
doi:10.5061/dryad.jm58p
摘要:
for species detection from DNA present into the environment. In this study, we tested if an environmental DNA (eDNA) metabarcoding approach, using water samples
Data from: Ecosystem biomonitoring with eDNA: metabarcoding across the tree of life in a tropical marine environment
负责人:
关键词:
eukaryotes;ecosystem based management;biodiversity;prokaryotes;Environmental DNA;shotgun sequencing
DOI:
doi:10.5061/dryad.qq11c
摘要:
yotes identified across all assays, highlighting the need for multiple metabarcoding assays to catalogue biodiversity. Lastly, focusing on the fish genus Lethrinus
Data from: Tag jumps illuminated – reducing sequence-to-sample misidentifications in metabarcoding studies
负责人:
关键词:
Environmental DNA;Metabarcoding;Tag jumping;Diversity assessment;Second generation sequencing;Chimeras
DOI:
doi:10.5061/dryad.64687
摘要:
Metabarcoding of environmental samples on second-generation sequencing platforms has rapidly become a valuable tool for ecological studi
Data from: Quantification of mesocosm fish and amphibian species diversity via eDNA metabarcoding
负责人:
关键词:
Environmental DNA;Metabarcoding;Gambusia holbrooki;Community Ecology;Semotilus atromaculatus;Lepomis macrochirus;Fundulus notatus;Catostomus commersonii;Pimephales promelas;Cyprinus carpio;eDNA;Campostoma anomalum;Rana catesbeiana
DOI:
doi:10.5061/dryad.r6m04
摘要:
tected species. Our objective was to determine whether environmental DNA (eDNA) sampling and metabarcoding analysis can be used to accurately measure species diversity in aquatic
Data from: Environmental monitoring through protist NGS metabarcoding: assessing the impact of fish farming on benthic foraminifera communities
负责人:
关键词:
Environmental DNA;DNA Barcoding;Protists;Ecotoxicology;Foraminifera;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.4108h
摘要:
ble for large-scale biomonitoring efforts involving numerous samples. Here, we propose to alleviate this laborious task by developing protist metabarcoding
Data from: Non-specific amplification compromises environmental DNA metabarcoding with COI
负责人:
关键词:
Environmental DNA;12S;Metabarcoding;Actinopterygii;COI;eDNA;primer design
DOI:
doi:10.5061/dryad.b8f6s44
摘要:
1. Metabarcoding extra-organismal DNA from environmental samples is now a key technique in aquatic biomonitoring and ecosystem health assessment

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