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Data from: Motion analysis of non-model organisms using a hierarchical model: influence of setup enclosure dimensions on gait parameters of Swinhoe
负责人:
关键词:
generalized linear model;Bayesian statistics;PyMC3;None;Motion analysis;Tamiops swinhoei;Python
DOI:
doi:10.5061/dryad.10rn5
摘要:
ed significant differences in some of the parameters depending on enclosure dimensions. In contrast, we used a hierarchical Bayesian generalized linear model (GLM) tha
Data from: Bayesian clustering analyses for genetic assignment and study of hybridization in oaks: effects of asymmetric phylogenies and asymmetric
负责人:
关键词:
microsatellites;Quercus robur;structure;Simulation;Bayesian clustering;BAPS;Quercus pubescens;Quercus petraea
DOI:
doi:10.5061/dryad.b64b4
摘要:
of phylogenetic relationships and sampling scheme on the inferred clustering solution and on the performance of Bayesian clustering analysis, I simulated genotypes of the interfertile oak species
Data from: Bayesian analysis of biogeography when the number of areas is large
负责人:
关键词:
Bayesian biogeographic inference;Vireya;data augmentation;Markov chain Monte Carlo;historical biogeography;ancestral area analysis;Cenozoic;Rhododendron
DOI:
doi:10.5061/dryad.8346r
摘要:
e methods is the computational limit on the number of areas that can be specified. We propose a Bayesian approach for inferring biogeographic history tha
Data from: Superregular grammars do not provide additional explanatory power but allow for a compact analysis of animal song
负责人:
Morita, Takashi
关键词:
animal song gibbon language Bayesian analysis context-free grammar Hybrids of Hylobates agilis and Hylobates albibarbis
DOI:
doi:10.5061/dryad.mn12jv2
摘要:
e superregular analyses of animal song are understudied. The goal of this paper is to perform a superregular analysis of animal song, using data from gibbons
Data from: Upstream analyses create problems with DNA-based species delimitation
负责人:
关键词:
species delimitation;bpp program;Bayesian;coalescent
DOI:
doi:10.5061/dryad.3hc8s
摘要:
for analyses with bpp), which can lead to under or overestimation of biodiversity, even though the Bayesian program bpp itself may perform very well. These res
Data from: Bayesian estimation of fossil phylogenies and the evolution of early to middle Paleozoic crinoids (Echinodermata)
负责人:
关键词:
DOI:
doi:10.5061/dryad.6hb7j
摘要:
to accommodate the study of fossil taxa. Under a Bayesian framework, the recently developed fossilized birth–death (FBD) process provides a more realistic tree
Data from: Data concatenation, Bayesian concordance and coalescent-based analyses of the species tree for the rapid radiation of Triturus newts
负责人:
关键词:
454 sequencing;crested newt;Gene tree;transcriptome;multi-species coalescent;Triturus;marbled newt
DOI:
doi:10.5061/dryad.mm81p
摘要:
, obtained with 454 sequencing. Our dataset includes twenty Triturus newts and represents all nine species. Bayesian analysis of population structure
Data from: Evaluating Bayesian stable isotope mixing models of wild animal diet and the effects of trophic discrimination factors and informative
负责人:
关键词:
Bayesian mixing models;Informative priors;stable isotopes;Trophic Discrimination Factors
DOI:
doi:10.5061/dryad.6m905qfvp
摘要:
and gut contents. For stable isotope analyses of diet, Bayesian stable isotope mixing models (BSIMMs) are increasingly used to infer the relative importance
Data from: A Bayesian method for analyzing lateral gene transfer
负责人:
关键词:
Bayesian Lateral gene transfer Horizontal gene transfer Gene duplication Gene loss Phylogenetics Phylogenomics MCMC Reconciliation
DOI:
doi:10.5061/dryad.f78r2
摘要:
in a genome-wide analysis of two groups of bacteria: Mollicutes and Cyanobacteria. Our analyses show that although the LGT rate between distant species is high, the net
Data from: Approximate Bayesian computation analysis of EST-associated microsatellites indicates that the broadleaved evergreen tree Castanopsis
负责人:
关键词:
glacial refugia;Late Pleistocene;Castanopsis sieboldii;Demography;approximate Bayesian computation (ABC);Holocene;phylogeography
DOI:
doi:10.5061/dryad.5sb1219
摘要:
d approximate Bayesian computation (ABC) for model comparison and parameter estimation for the demographic modelling using 27 EST associated microsatellites. We also performed

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