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Data from: A functional diversity approach of crop sequences reveals that weed diversity and abundance show different responses
- 负责人：
- Mahaut, Lucie
- 关键词：
- Agroecology Crop rotation Disturbance Resources availability Hill's number functional diversity crop sequences Weed management
- DOI：
- doi:10.5061/dryad.qf0k11c
- 摘要：
- timings, disturbance types and light availability. Using a large-scale weed monitoring database, we assessed crop sequence diversity for 1045 crop sequences
Data from: Sequencing historical specimens: successful preparation of small specimens with low amounts of degraded DNA
- 负责人：
- DOI：
- doi:10.5061/dryad.31g05
- 摘要：
- Despite advances that allow DNA sequencing of old museum specimens, sequencing small-bodied, historical specimens can be challenging and unreliable
Data from: The impact of library preparation protocols on the accuracy of allele frequency estimates in Pool-Seq data
- 负责人：
- DOI：
- doi:10.5061/dryad.p31j8
- 摘要：
- Sequencing pools of individuals (Pool-Seq) is a cost-effective method to determine genome-wide allele frequency estimates. Given the importance
Data from: Metazoan mitochondrial gene sequence reference datasets for taxonomic assignment of environmental samples
- 负责人：
- DOI：
- doi:10.5061/dryad.2v00t
- 摘要：
- reference dataset available for taxonomic assignments. Here, we retrieved all metazoan mitochondrial gene sequences from GenBank, and then quality filtered
Data from: How to optimize the precision of allele and haplotype frequency estimates using pooled-sequencing data
- 负责人：
- DOI：
- doi:10.5061/dryad.cr65v
- 摘要：
- ng this analytical and experimental framework, we provide guidelines to optimize the design of pooled sequencing experiments. Finally, we sequence replicated pools
Data from: Consistency of VDJ rearrangement and substitution parameters enables accurate B cell receptor sequence annotation
- 负责人：
- DOI：
- doi:10.5061/dryad.149m8
- 摘要：
- of antigens. It is now possible to sequence these BCRs in high throughput; analysis of these sequences is bringing new insight into how antibodies develop
Data from: Stepwise Threshold Clustering: a new method for genotyping MHC loci using next-generation sequencing technology
- 负责人：
- DOI：
- doi:10.5061/dryad.4fn4g
- 摘要：
- -Dirichlet clustering algorithm to cluster similar sequences at increasing levels of sequence similarity. By applying frequency and similarity based criteria
Data from: SSR_pipeline: a bioinformatic infrastructure for identifying microsatellites from paired-end Illumina high-throughput DNA sequencing data
- 负责人：
- DOI：
- doi:10.5061/dryad.n65k2
- 摘要：
- o a single composite DNA sequence, and 3) identify sequences that possess microsatellites (both simple and compound) conforming to user-specified parameters
Data from: Prophage as a genetic reservoir: Promoting diversity and driving innovation in the host community
- 负责人：
- DOI：
- doi:10.5061/dryad.vk037
- 摘要：
- Sequencing of bacterial genomes has revealed an abundance of prophage sequences in many bacterial species. Since these sequences are accessible, thr
Data from: Efficiency of ddRAD target enriched sequencing across spiny rock lobster species (Palinuridae: Jasus)
- 负责人：
- DOI：
- doi:10.5061/dryad.3dk40
- 摘要：
- Double digest restriction site-associated DNA sequencing (ddRADseq) and target capture sequencing methods are used to explore population
