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Data from: Identifying conserved genomic elements and designing universal bait sets to enrich them
负责人:
关键词:
Arachnida;Coleoptera;Lepidoptera;ultraconserved element;phylogeny;Evolution;conserved element;Hemiptera;phylogenomics;Diptera
DOI:
doi:10.5061/dryad.v0k4h
摘要:
Arachnida, Coleoptera, Diptera, Hemiptera or Lepidoptera to identify thousands of conserved loci in each group and design target enrichment baits to capture
Data from: Genome-specific histories of divergence and introgression between an allopolyploid unisexual salamander lineage and two ancestral se
负责人:
Denton, Robert
关键词:
Introgression polyploidy ultraconserved elements Ambystoma salamanders unisexual lineages
DOI:
doi:10.5061/dryad.q8j5k80
摘要:
t drives the longevity of putatively asexual groups. Here, we capitalize on three recent innovationsultraconserved element (UCE) sequencing, bioinformatic
Data from: Phylogenomics of horned lizards (genus: Phrynosoma) using targeted sequence capture data
负责人:
关键词:
Species tree;Concatenation;ultraconserved elements;phylogeny;SVD quartets;Phrynosomatidae;systematics;coalescent;Phrynosoma
DOI:
doi:10.5061/dryad.82p92
摘要:
oughout the genome. In this study, we use targeted sequence capture (TSC) data from 540 ultraconserved elements and 44 protein-coding genes to estimate
Data from: Phylogenomic analysis of a rapid radiation of misfit fishes (Syngnathiformes) using ultraconserved elements
负责人:
关键词:
Solenostomidae;Callionymidae;Pegasidae;Mullidae;ultraconserved elements;Syngnathidae;Aulostomidae;Fistulariidae;Centriscidae;Syngnathiformes;rapid radiation;Dactylopteridae;phylogenomics
DOI:
doi:10.5061/dryad.v7f76
摘要:
ween the major lineages. In this study, we use a dataset of ultraconserved elements (UCEs) to conduct the first phylogenomic study of Syngnathiformes. UCEs have
Data from: Bayes factors unmask highly variable information content, bias, and extreme influence in phylogenomic analyses
负责人:
关键词:
information content;Bayes factors;Bias;turtles;ultraconserved elements;amniotes;posterior probability;phylogenomics;Expressed Sequence Tags;Negative Constraints;ortholog
DOI:
doi:10.5061/dryad.8gm85
摘要:
support (the Bayes factor) that both demonstrates and averts several limitations of more frequently employed support measures (suc
Data from: Genomic, ecological, and morphological approaches to investigating species limits: a case study in modern taxonomy from
负责人:
关键词:
phylogeography;Acanthuridae;Prionurus laticlavius;niche modeling;ultraconserved elements;Pleistocene to present;Prionurus punctatus;reef fish
DOI:
doi:10.5061/dryad.27js55v
摘要:
-based approaches, a mitochondrial gene (COI), more than 800 nuclear loci (Ultraconserved Elements), and abiotic niche comparisons. The results indic
Data from: Explosive diversification of marine fishes at the Cretaceous-Paleogene boundary
负责人:
关键词:
Acanthomorpha;ultraconserved elements;acanthomorphs;phylogenomics;percomorphs;vertebrates
DOI:
doi:10.5061/dryad.085dd
摘要:
ciated timescales have not been interrogated using phylogenomic approaches. Here, we use targeted enrichment of >1,000 ultraconserved elements in conjunction
Data from: Sequence capture of ultraconserved elements from bird museum specimens
负责人:
关键词:
systematics;Aphelocoma woodhouseii;phylogeography;Birds;Bioinfomatics\/Phyloinfomatics;Aphelocoma sumichrasti;Aphelocoma californica;Gallus gallus
DOI:
doi:10.5061/dryad.qh8sh
摘要:
museum specimens. Here, we use one type of NGS approach, sequence capture of ultraconserved elements (UCEs), to collect data from bird museum specimens as old as 120
of ultraconserved elements
负责人:
关键词:
Plestiodon;ancestral area;Miocene;Pliocene;phylogenomics;phylogeography;Pleistocene
DOI:
doi:10.5061/dryad.21j0n
摘要:
phic reconstructions impacted by the use of different phylogenetic trees? Location: Mexico. Methods: We used target enrichment of ultraconserved elements (UCEs

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