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Data from: Surprising complexity of the ancestral apoptosis network
负责人:
关键词:
DOI:
doi:10.5061/dryad.12
摘要:
stomes, explaining significant functional differences between proteins that until now were believed to be orthologous. Similarly, the evolution of the Bcl-2
Data from: Separating golgi proteins from cis to trans reveals underlying properties of cisternal localization
负责人:
关键词:
Arabidopsis thaliana;Golgi cisternae;Golgi cisternae proteomics membrane vesicle
DOI:
doi:10.5061/dryad.89s4n70
摘要:
provide a means to better understand the functional roles of Golgi proteins and how they operate sequentially. Protein and glycan distributions ar
Data from: Izumo1 and Juno: the evolutionary origins and coevolution of essential sperm-egg binding partners
负责人:
关键词:
positive selection;Izumo1 and Izumo Family;gene family evolution;Juno and Folate Receptor Family;Reproduction and Fertilization;Coevolution
DOI:
doi:10.5061/dryad.gh208
摘要:
Reproductive proteins are among the most rapidly evolving classes of proteins. For a subset of these, rapid evolution is driven
Data from: Novel and divergent genes in the evolution of placental mammals
负责人:
关键词:
Placentalia;new genes;MCL clustering;Eutheria;molecular evolution
DOI:
doi:10.5061/dryad.4pb80
摘要:
Analysis of genome sequences within a phylogenetic context can give insight into the mode and tempo of gene and protein evolution, including
Data from: Using viromes to predict novel immune proteins in non-model organisms
负责人:
Quistad, Steven D.
关键词:
evolution Viruses immunity coral comparative genomics Corals Model Organisms Immunology Genomics
DOI:
doi:10.5061/dryad.tb2p4
摘要:
st this hypothesis, a mock human virome was generated and compared to the human proteome using tBLASTn, resulting in 36 proteins known to be involved in immunity
Data from: The population genomics of sunflowers and genomic determinants of protein evolution revealed by RNAseq
负责人:
关键词:
selection;transcriptome;Helianthus;McDonald-Kreitman test;Sequence Divergence;RNAseq;gene expression
DOI:
doi:10.5061/dryad.rs4k0
摘要:
ll capable of hybridizing in the wild. The recent advent of Next Generation Sequencing (NGS) permits investigation of genome wide rates of protein evolution
Data from: Protein deprivation facilitates the independent evolution of behavior and morphology
负责人:
关键词:
evolvability;autonomy;nutrition;genetic covariance;genotype-by-environment interaction
DOI:
doi:10.5061/dryad.7rt21s4
摘要:
c covariance structures contribute to the potential for the independent evolution of these traits. We demonstrate that protein-deprived environments tend to increase the potenti
Data from: The roles of compensatory evolution and constraint in aminoacyl tRNA synthetase evolution
负责人:
关键词:
DOI:
doi:10.5061/dryad.4p24g
摘要:
, the level at which a gene is expressed is a more general predictor of protein evolutionary rate. We find that gene expression level explains 10-56
Data from: The N-end Rule Pathway and Ubr1 enforce protein compartmentalization via P2-encoded cellular location signals
负责人:
关键词:
P2 residue;N-degron;P2;Ubr1;protein quality control;N-end rule;Protein Folding;Saccharomyces cerevisiae;proteolysis
DOI:
doi:10.5061/dryad.r837vv7
摘要:
on mutants of misfolded proteins, and global and targeted bioinformatic analyses of the yeast proteome, we determined that Ubr1 preferentially targets
Data from: How to calculate the non--synonymous to synonymous rate ratio of protein-coding genes under the Fisher--Wright mutation--selecti
负责人:
关键词:
influenza;monocots;PB2;Chloroplast;influenza;non-synonymous to synonymous rate ratio;Evolution;adaptive evolution;rbcL
DOI:
doi:10.5061/dryad.3r3q4
摘要:
o to the selection coefficients acting at codon sites in protein-coding genes. Two theoretical cases are discussed and two examples from real data (a chloroplast gene and a virus

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