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Data from: Live imaging of symbiosis: spatiotemporal infection dynamics of GFP-labelled Burkholderia symbiont in the bean bug Riptortus pedestris
负责人:
关键词:
Symbiont colonization;Gut symbiotic bacteria;Green fluorescence protein;Riptortus pedestris;Insect symbiosis;Burkholderia;Stinkbug;population dynamics
DOI:
doi:10.5061/dryad.q1r19
摘要:
belled with green fluorescent protein (GFP), which enabled detailed observation of spatiotemporal dynamics and the colonization process of the symbiont in freshly prepared spec
Data from: Common internal allosteric network links anesthetic binding sites in a pentameric ligand-gated ion channel
负责人:
关键词:
ion channel;propofol;molecular dynamics;GLIC;allostery
DOI:
doi:10.5061/dryad.sp025
摘要:
molecular dynamics, with a coarse-grained model to enhance sampling. We find that in flooding simulations, both propofol and a generic particle localize
Data from: Conformational dynamics in TRPV1 channels reported by an encoded coumarin amino acid
负责人:
关键词:
coumarin;pore;SPAD;gating;TRPV1;non-canonical amino acids
DOI:
doi:10.5061/dryad.1kc2c
摘要:
, molecular dynamics simulations display alternating solvent exposure of Y671 in the closed and open states. Overall, the data point to a dynamic selectivity filter that may serve
Data from: Deciphering conjugative plasmid permissiveness dynamics in wastewater microbiomes
负责人:
关键词:
metagenomics;Niche Modelling;Microbial Biology;molecular evolution;Bioinfomatics\/Phyloinfomatics;Community Ecology
DOI:
doi:10.5061/dryad.636b0
摘要:
s is on the threat of AMRGs spreading and environmental maintenance, conjugative plasmid transfer dynamics within and between bacterial communities still remains lar
Data from: Evaluation and comparison of classical interatomic potentials through a user-friendly interactive web-interface
负责人:
关键词:
Force-field;molecular dynamics
DOI:
doi:10.5061/dryad.dd56c
摘要:
Classical empirical potentials/force-fields (FF) provide atomistic insights into material phenomena through molecular dynamics
Data from: Co-evolutionary dynamics between a defensive microbe and a pathogen driven by fluctuating selection
负责人:
关键词:
symbiosis;Enterococcus faecalis;Caenorhabditis elegans;Host Parasite Interactions;Species Interactions;molecular evolution;Experimental evolution;Coevolution;Staphylococcus aureus
DOI:
doi:10.5061/dryad.0b707
摘要:
analyses across evolutionary time, we found patterns of pathogen local adaptation and defensive microbe–pathogen co-evolution via fluctuating selection dynamics
Data from: Modelling the spread of innovation in wild birds
负责人:
Shultz, Thomas R.
关键词:
social learning innovation diffusion conformity bias animal culture agent-based computer simulation differential equations
DOI:
doi:10.5061/dryad.2p5rb
摘要:
(AM) algorithm, which has roots in chemistry, molecular biology and theoretical computer science. The simulations generate testable predictions and provide seve
Data from: Salty Sensors, Fresh Ideas: The use of molecular and imaging sensors in understanding plankton dynamics across mar
负责人:
关键词:
In situ molecular systems;Marine;In situ Imaging Systems;Salty Divide;Freshwater;1990-2019
DOI:
doi:10.5061/dryad.29pm4qs
摘要:
In situ molecular and imaging instrumentation development has advanced our knowledge of plankton processes in marine ecosystems. However, these
Data from: Network structure and local adaptation in coevolving bacteria-phage interactions
负责人:
关键词:
Host Parasite Interactions;Experimental evolution;bacteria;Coevolution;Bacteriophage;Adaptation
DOI:
doi:10.5061/dryad.5dk27
摘要:
h as coevolutionary dynamics and local adaptation. We capitalized on methods commonly employed in community ecology to quantify how the structure of community

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