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共检索到212条 ,权限内显示50条;

Data from: Molecular dynamics investigation of gluazo, a photo-switchable ligand for the glutamate receptor GluK2
- 负责人:
- DOI:
- doi:10.5061/dryad.7r71q
- 摘要:
- Photochromic ligands (PCLs), defined as photoswitchable molecules that are able to endow native receptors with a sensitivity towards light, have bec

Data from: Crowding induces entropically-driven changes to DNA dynamics that depend on crowder structure and ionic conditions
- 负责人:
- DOI:
- doi:10.5061/dryad.77g469g
- 摘要:
- and conformational dynamics of large DNA molecules. Specifically, we measure the mean-squared center-of-mass displacements, as well as the conformational size, shape

Data from: Evolutionary diversification of reef corals: a comparison of the molecular and fossil records
- 负责人:
- DOI:
- doi:10.5061/dryad.s7dj0
- 摘要:
- Understanding historical patterns of diversity dynamics is of paramount importance for many evolutionary questions. The fossil record has lon

Data from: A hyperparasite affects the population dynamics of a wild plant pathogen
- 负责人:
- DOI:
- doi:10.5061/dryad.mv332
- 摘要:
- . We conclude that this hyperparasite may likely impact on its host population dynamics and argue for increased focus on the role of hyperpar

Data from: Antibiotic uptake across gram-negative outer membranes: better predictions towards better antibiotics
- 负责人:
- 关键词:
- outer membrane vesicles;molecular dynamics simulation;outer membrane porins;membrane permeability
- DOI:
- doi:10.5061/dryad.vdncjsxq1
- 摘要:
- -throughput experimental assay of outer membrane vesicle swelling. Parallel molecular dynamics simulations of compound uptake through E. coli OmpF are use

Data from: A multiscale biophysical model for the recruitment of actin nucleating proteins at the membrane interface
- 负责人:
- DOI:
- doi:10.5061/dryad.qbzkh18f6
- 摘要:
- actin-binding proteins, mDia2, NWASP, and gelsolin, to membranes containing PI(4,5)P2 lipids. We perform molecular dynamics simulations on the protein-bila

Data from: Molecular mechanism of viscoelastic polymer enhanced-oil-recovery in nanopores
- 负责人:
- DOI:
- doi:10.5061/dryad.61g8620
- 摘要:
- at significance for the advancement of oil exploitation. Using molecular dynamics simulations, we investigated the detailed process of the viscoelastic polymer

Data from: Modelling dynamics in protein crystal structures by ensemble refinement
- 负责人:
- 关键词:
- DOI:
- doi:10.5061/dryad.5n01h
- 摘要:
- . We generated ensembles of structures by time-averaged refinement, where local molecular vibrations were sampled by molecular-dynamics (MD) simulation whilst

Data from: Structural consequence of the most frequently recurring cancer-associated substitution in DNA polymerase ?
- 负责人:
- DOI:
- doi:10.5061/dryad.1sb340g
- 摘要:
- ing towards the exonuclease site. Molecular dynamics simulations suggest that R301 interferes with DNA binding to the exonuclease site, an outcome

Data from: Ensembler: enabling high-throughput molecular simulations at the superfamily scale
- 负责人:
- DOI:
- doi:10.5061/dryad.7fg32
- 摘要:
- with biomolecular simulation. While computational infrastructure has grown rapidly, simulations on an omics scale are not yet widespread, primarily because softwar