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FAIRsharing record for: DisGeNET: a knowledge base for disease genomics;;DisGeNET
负责人:
关键词:
Gene Biomedical Science Human Genetics Life Science Genetic polymorphism Disease Mutation
DOI:
doi:10.25504/fairsharing.fssydn
摘要:
variants and 10,358 diseases, traits, and phenotypes. The data are homogeneously annotated with controlled vocabularies and community-driven ontologies
Data from: Adaptive differences in gene expression associated with heavy metal tolerance in the soil arthropod Orchesella cincta
负责人:
Roelofs, Dick
关键词:
cadmium collembola micro-evolution transcription profiling suppression subtractive hybridisation Adaptation
DOI:
doi:10.5061/dryad.1817
摘要:
in tolerant animals. This cluster was also characterized by elevated constitutive expression in the tolerant population. Gene ontology analysis revealed tha
FAIRsharing record for: Animal Transcription Factor Database;;AnimalTFDB
负责人:
关键词:
Gene Life Science Annotation Gene Ontology enrichment Gene feature Binding motif Protein interaction Protein structure Transcription factor Micro RNA
DOI:
doi:10.25504/fairsharing.e65js
摘要:
of transcription factors from 50 genomes from species including Homo sapiens and Caenorhabditis elegans. The database also has information on co-transcription factors
Data from: Characterization of transcriptomes from sexual and asexual lineages of a New Zealand snail (Potamopyrgus antipodarum)
负责人:
关键词:
Molluscs;Evolution of Sex;Potamopyrgus antipodarum;Transcriptomics;molecular evolution
DOI:
doi:10.5061/dryad.v72m2
摘要:
of sequence reads produced 41 396 contigs, and sequence similarity-based Gene Ontology annotations were obtained for 3740 contigs. We detected 408 315 SNP loci
Data from: Transcriptome sequencing and phylogenomic resolution within Spalacidae (Rodentia)
负责人:
关键词:
Myospalacinae;Spalacidae;transcriptome;subterranean mammals;mitochondrial genome;Late Miocene;Rhizomyinae;phylogenomics;Spalacinae
DOI:
doi:10.5061/dryad.gs135
摘要:
nucleotide sequence (NT), Gene Ontology (GO), Cluster of Orthologous Groups (COG), and Kyoto Encyclopedia of Genes and Genomes (KEGG). A total of 5,116 nuclear
Data from: Optimisation of next generation sequencing transcriptome annotation for species lacking sequenced genomes
负责人:
关键词:
Genomics\/Proteomics;Transcriptomics;molecular evolution;Bioinfomatics\/Phyloinfomatics
DOI:
doi:10.5061/dryad.2v3h4
摘要:
h the quantity and accuracy of gene detection. Our analysis also reveals that direct genome mapping recovers a more representative profile of Gene Ontology
Data from: Analysis of expressed sequence tags from the placenta of the live-bearing fish Poeciliopsis (Poeciliidae)
负责人:
关键词:
Placenta;Poeciliopsis presidionis;Poeciliid fishes;Poeciliopsis;parent-offspring conflict;expressed sequence tag;Poeciliopsis turneri;alpha-2 macroglobulin;Viviparity;Poeciliidae
DOI:
doi:10.5061/dryad.8257
摘要:
y searches and Gene Ontology annotation. Reverse transcriptase-PCR was used to verify placenta tissue expression of a putative candidate gene, alpha-2 macroglobulin. 1956 (71
Data from: The role of transcriptomes linked with responses to light environment on seedling mortality in a subtropical forest, China
负责人:
关键词:
seedlings dynamics;RNA-seq;Survival rate;transcriptomic similarity;subtropical forest;Determinants of plant community diversity and structure;Light availability
DOI:
doi:10.5061/dryad.2cf46
摘要:
to which species share homologous genes related to gene ontologies for light use and harvesting. These species similarities are used in ne
Data from: Genomic characterization of the evolutionary potential of the sea urchin Strongylocentrotus droebachiensis facing ocean acidification
负责人:
关键词:
Strongylocentrotus purpuratus;System genetics;gene set variation analysis;Genetic Variation;Plasticity;present;RNAseq;Holocene;climate change
DOI:
doi:10.5061/dryad.1f6t8
摘要:
of the sea urchin Strongylocentrotus droebachiensis. We used a gene ontology-based approach to integrate expression profiles into indirect measures of cellular

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