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Data from: Cross-ontology multi-level association rule mining in the Gene Ontology
负责人:
关键词:
gene ontology;Cross-ontology mining;data mining;association rule mining
DOI:
doi:10.5061/dryad.nr353
摘要:
The Gene Ontology (GO) has become the internationally accepted standard for representing function, process, and location aspects of gene
Data from: A unified anatomy ontology of the vertebrate skeletal system
负责人:
关键词:
Phenotype;skeleton;Vertebrata;reasoning;Integration;semantics;comparative morphology;ontology
DOI:
doi:10.5061/dryad.6bt92
摘要:
, including the Common Anatomy Reference Ontology (CARO), Gene Ontology (GO), Uberon, and Cell Ontology (CL) and is freely available to the community
Data from: Identification of biomarkers for Barcelona Clinic Liver Cancer staging and overall survival of patients with hepatocellular carcinoma
负责人:
关键词:
homo species;Hepatocellular carcinoma;Holocene
DOI:
doi:10.5061/dryad.10m4k6q
摘要:
. Significantly enriched gene ontology biological process terms included RNA processing, non-coding RNA processing and phosphodiester bond hydrolysis
Data from: Habitat-associated phylogenetic community patterns of microbial ammonia oxidizers
负责人:
关键词:
DOI:
doi:10.5061/dryad.2k5rf
摘要:
, analyzing 5776 amoA gene sequences from >300 isolation sources, and clustering habitats by environmental ontologies. As a whole, phylogenetic richne
Data from: Environmental adaptation contributes to gene polymorphism across the Arabidopsis thaliana genome
负责人:
关键词:
Arabidopsis thaliana;genome-wide polymorphism;environment;Genetic Variation
DOI:
doi:10.5061/dryad.q9p4s
摘要:
t balancing selection among heterogeneous environments maintains genetic variation at ecologically important genes. Comparison of the gene ontology annotations shows tha
Data from: The rpb2 gene represents a viable alternative molecular marker for the analysis of environmental fungal communities
负责人:
关键词:
Fungi;DNA Barcoding;metagenomics;Community Ecology
DOI:
doi:10.5061/dryad.vj3p9
摘要:
fungal lineages. The gene exhibited sufficient variation for the use in phylogenetic analyses and taxonomic assignments, although it amplifies als
Data from: Comparative transcriptomics of Entelegyne spiders (Araneae, Entelegynae), with emphasis on molecular evolution of orphan genes
负责人:
关键词:
DOI:
doi:10.5061/dryad.3pq3q
摘要:
, and N. cooperi) were sequenced and de novo assembled. Each assembly was assessed for quality and completeness and functionally annotated using gene ontology inf
Data from: New Zealand tree and giant w?t? (Orthoptera) transcriptomics reveal divergent selection patterns in metabolic loci
负责人:
关键词:
Diversifying selection;transcriptome;Metabolic Rate;molecular evolution
DOI:
doi:10.5061/dryad.33jn722
摘要:
s found 83 genes that are under positive selection for at least one codon. A wide variety of Gene Ontology terms, enzymes and KEGG pathways are represented amo
Data from: Discovery and evaluation of candidate sex-determining genes and xenobiotics in the gonads of lake sturgeon (Acipenser fulvescens)
负责人:
关键词:
Acipenser fulvescens;polyploidy;Trichomonas;transcriptome;Pyrosequencing 454;Schistosoma
DOI:
doi:10.5061/dryad.q0740kp8
摘要:
. In particular, 454 pyrosequencing of nonmodel species has been used to characterize expressed sequence tags, xenobiotics, gene ontologies, and r
Data from: Comparative transcriptomics and gene expression in larval tiger salamander (Ambystoma tigrinum) gill and lung tissues as revealed
负责人:
关键词:
454;candidate gene;genomics;cDNA;respiration;Ambystoma tigrinum;amphibian
DOI:
doi:10.5061/dryad.69t48k87
摘要:
expression level with variation among transcripts and individuals. We identified genes and gene ontology terms related to respiration and compared their relative expression

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