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Data from: Sequence capture phylogenomics of historical ethanol-preserved museum specimens: unlocking the rest of the vault
负责人:
关键词:
museum collections;degraded DNA;Opiliones;ultraconserved elements;ethanol preservation;phylogenomics
DOI:
doi:10.5061/dryad.sh5b962
摘要:
-preserved museum collections. Across 35 fresh and 15 historical museum samples of the arachnid order Opiliones, an average of 345 UCE loci were included
Data from: The evolution of peafowl and other taxa with ocelli (eyespots): a phylogenomic approach
负责人:
关键词:
homology;Argusianus;sexual selection;Polyplectron;eyespots;Afropavo;UCE's;Rheinardia;Pavo;ocelli;Haematortyx;Phasianidae;Galloperdix
DOI:
doi:10.5061/dryad.66942
摘要:
ultraconserved elements (UCEs) and three mitochondrial regions. The three ocellated genera did form a strongly supported clade, but each ocellated genus was sister
Data from: Willet be one species or two?: a genomic view of the evolutionary history of Tringa semipalmata
负责人:
关键词:
Tringa;Tringa semipalmata inornata;Z chromosome;Tringa semipalmata;shorebirds;drift;species delimitation;Tringa semipalmata semipalmata;ultraconserved elements;sexual selection;mito-nuclear discordance
DOI:
doi:10.5061/dryad.2361d
摘要:
e reciprocally monophyletic between the 2 subspecies and indicated divergence approximately 700,000 yr ago. The UCE dataset included 4,635 loci containing 19,322
Data from: Phylogenomic insights into the evolution of stinging wasps and the origins of ants and bees
负责人:
关键词:
Mesozoic;Next-generation sequencing;ultraconserved elements;social insects;Anthophila;Hymenoptera;taxon sampling;Cenozoic;molecular systematics;phylogenomics;Aculeata;Apocrita
DOI:
doi:10.5061/dryad.r8d4q
摘要:
, including the phylogenetic affinities of ants and bees [5–7]. We used ultraconserved element (UCE) phylogenomics [7,12] to resolve relationships amo
Data from: Cryptic diversity in the Mexican highlands: thousands of UCE loci help illuminate phylogenetic relationships, species limits
负责人:
关键词:
systematics;Crotalus;genomics;Bayesian;Coalescence;speciation;Rattlesnakes
DOI:
doi:10.5061/dryad.4467407
摘要:
empiricists with uncertainty regarding analytical tools. We use a large ultraconserved element (UCE) data set (>3000 loci) from rattlesnakes of the Crotalus
Data from: Ultraconserved elements sequencing as a low-cost source of complete mitochondrial genomes and microsatellite markers in non-model amniotes
负责人:
关键词:
Mitogenomes microsatellites Ultraconserved elements
DOI:
doi:10.5061/dryad.33656
摘要:
studies, and probably will complement genomic data in years to come. Here we show that besides providing abundant genomic data, UCE sequencing
Data from: Validity of the Diplostomoidea and Diplostomida (Digenea, Platyhelminthes) upheld in phylogenomic analysis
负责人:
关键词:
metacercaria;Diplostomoidea;Platyhelminthes;Strigeida;Hysteromorpha;Diplostomida;Cotylurus;Holocene;Nuclear-mitochondrial discordance;Alaria;phylogenomics
DOI:
doi:10.5061/dryad.7kj7t1q
摘要:
phylogeny, but supported in the UCE phylogeny. We speculate this mitonuclear discordance is related to ancient, rapid radiation in the Digenea. Both UCE
Data from: Hidden histories of gene flow in highland birds revealed with genomic markers
负责人:
关键词:
gene flow;systematics;Aphelocoma;Quaternary;Aphelocoma wollweberi;phylogeography;Aphelocoma ultramarina;Birds;introgression;Aves;Genomic;speciation
DOI:
doi:10.5061/dryad.s8v80
摘要:
tests). Results based on 4303 UCE loci and 2500 informative SNPs are consistent with varying degrees of gene flow among highland areas. In some cas
Data from: An in silico comparison of protocols for dated phylogenomics
负责人:
关键词:
exon-capture;Primates;UCE;RADseq;phylogenomics
DOI:
doi:10.5061/dryad.8hs71
摘要:
r than those of the UCE, RADseq and mitochondrial data, but vice versa for the deepest nodes in the primate phylogeny. This observation is explained

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