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Data from: Stochastic character mapping of state-dependent diversification reveals the tempo of evolutionary decline in self-compatible Onagra
负责人:
关键词:
Onagraceae
DOI:
doi:10.5061/dryad.9jj428f
摘要:
of a phylogeny. The method is widely employed for standard substitution models of character evolution. However, current approaches cannot be used for models tha
in a rapidly evolving plastid genome
负责人:
关键词:
dN\/dS;plastid;Campanula americana;selection;Chloroplast;Campanulastrum americanum
DOI:
doi:10.5061/dryad.d143r
摘要:
nucleotide substitution rates in the plastid genome are continuing to act at the intraspecific level. Accelerated plastid genome evolution may increase the likelihood
Data from: Genetic distance for a general non-stationary Markov substitution process
负责人:
关键词:
Markov process;non-stationary;molecular clock;maximum likelihood;Genetic distance
DOI:
doi:10.5061/dryad.g7g0n
摘要:
us to conclude that analyses of evolutionary rates and phylogenies will be substantively improved by application of this model.
Data from: Comparing pool?seq, rapture, and GBS genotyping for inferring weak population structure: the American lobster (Homarus americanus
负责人:
关键词:
Rapture;population genetics;Homarus americanus;Marine genomics;GBS;Pool-Seq;Homarus
DOI:
doi:10.5061/dryad.64f7982
摘要:
estimates three to five times higher than GBS and Rapture, while the latter two methods returned similar FST estimates, indicating that individual?based
Data from: Ecology has contrasting effects on genetic variation within species versus rates of molecular evolution across species in water beetles
负责人:
关键词:
CO1;Haliplidae;Genetic Variation;PGLS;Dytiscidae;water beetles;Recent;rate of evolution;Noteridae;Gyrinidae
DOI:
doi:10.5061/dryad.926pq
摘要:
s substitution rates across species depended mainly on habitat types, and running water specialists had the highest rate. These results are consiste
Data from: Reconstructing the phylogenetic history of long-term effective population size and life-history traits using patterns of amino acid
负责人:
关键词:
molecular evolution;Birds;Mammals;Mammalia;Aves
DOI:
doi:10.5061/dryad.72594
摘要:
r synonymous substitution rates (dN/dS), and potentially also the ratio of radical over conservative amino acid replacement rates (Kr/Kc), are negatively correlate
Data from: Increased evolutionary rates and conserved transcriptional response following allopolyploidisation in brown algae
负责人:
关键词:
marine diversity;10 My;transcriptional response;allopolyploidy;hybridization;Substitution rates;Pelvetiopsis;gene expression
DOI:
doi:10.5061/dryad.70955d1
摘要:
branches of the Tree of Life. The aim of this study was to compare substitution rates and gene expression patterns in two allopolyploid brown algae
Data from: Nuclear and mitochondrial sequence data reveal and conceal different demographic histories and population genetic processes in Caribbean
负责人:
关键词:
historical demography;Acanthemblemaria aspera;Quaternary;population genetics;reef fishes;Chaenopsidae;Acanthemblemaria spinosa;Caribbean;Substitution rates;Acanthemblemaria
DOI:
doi:10.5061/dryad.7998
摘要:
r effective population sizes and substitution rates. This expectation was tested for two closely related coral reef fish, the tube blennies Acanthemblemaria aspera
Data from: Predicting the ancestral character changes in a tree is typically easier than predicting the root state
负责人:
关键词:
Ancestral state prediction;phylogenetic tree;character evolution;Markov model
DOI:
doi:10.5061/dryad.sc724
摘要:
that for the standard Yule tree, the task of reconstructing internal node states remains feasible, even for very high substitution rates. Moreove

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