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Data from: Genome-wide identification of microsatellites and transposable elements in the dromedary camel genome using whole genome sequencing data
负责人:
关键词:
Breeding strategies;Repetitive sequence;microsatellites;Next-generation sequencing;Camelus dromedarius;Transposable elements;de novo Assembly
DOI:
doi:10.5061/dryad.10h185k
摘要:
Transposable elements (TEs) along with simple sequence repeats (SSRs) are prevalent in eukaryotic genome, especially in mammals. Repetitive sequences
ng microsatellite markers (SSRs)
负责人:
Balas, Francisco Carlos
关键词:
Ex situ conservation Germplasm bank Fig tree SSRs Core collection Plant genetic resources
DOI:
doi:10.5061/dryad.2r107
摘要:
management. In this work, we used simple sequence repeat (SSR) markers to establish a core collection in this underutilised Mediterranean fruit tree
and SSR markers
负责人:
关键词:
microsatellites;Draft genome;transcriptomic;Symphonia globulifera L.f.;Clusiaceae;single nucleotide polymorphisms
DOI:
doi:10.5061/dryad.78ng1
摘要:
containing a complete open reading frame) and 1523 exact simple sequence repeats (SSRs, microsatellites). Aligning a published transcriptome
Data from: Dissimilarity of individual microsatellite profiles under different mutation models: empirical approach
负责人:
关键词:
microsatellite genotypes;Blumeria graminis;Cristatella mucedo;one year;Puccicnia triticina;mutation models;Puccinia triticina;genetic dissimilarity
DOI:
doi:10.5061/dryad.1b8n2b4
摘要:
Microsatellites (simple sequence repeats, SSRs) still remain popular molecular markers for studying neutral genetic variation. Two alternative
Data from: SSR_pipeline: a bioinformatic infrastructure for identifying microsatellites from paired-end Illumina high-throughput DNA sequencing data
负责人:
关键词:
microsatellite discovery;Next Generation Sequencing;Ephydra packardi;Python
DOI:
doi:10.5061/dryad.n65k2
摘要:
SSR_pipeline is a flexible set of programs designed to efficiently identify simple sequence repeats (e.g., microsatellites) from paired-end high
Data from: A linkage disequilibrium perspective on the genetic mosaic of speciation in two hybridizing Mediterranean white oaks
负责人:
关键词:
EST-SSRs;Quercus faginea;Quercus faginea Lamb.;outliers;genomic hitchhiking;Pliocene;Quercus pyrenaica Willd.;genetic mosaic;Quercus;divergence hitchhiking;Quercus pyrenaica;nSSRs;linkage disequilibrium
DOI:
doi:10.5061/dryad.np29h
摘要:
preferences. Ninety expressed sequence tag-simple sequence repeats (EST-SSRs) and eight nuclear SSRs were genotyped in 96 trees from each species. Genotyping
Data from: Molecular and morphological diversity of on-farm hazelnut (Corylus avellana L.) landraces from southern Europe and their role in the origin and diffusion of cultivated germplasm
负责人:
关键词:
filbert in situ conservation biodiversity simple sequence repeat (SSR) markers microsatellite domestication
DOI:
doi:10.5061/dryad.2vc0n
摘要:
genetic relationships using 10 simple sequence repeat (SSR) markers among these landraces, 57 well-known references cultivars, and 19 wild accessions. Among the 77 landraces
SSR markers
负责人:
关键词:
Fargesia spathacea complex;SSR;Genetic divergence;vegetative traits;altitude difference
DOI:
doi:10.5061/dryad.z34tmpg9c
摘要:
ed a study with 750 individuals from 39 representative populations in Fargesia spathacea complex using 14 SSR markers. We found varying degrees of gene
Data from: Different processes shape the patterns of divergence in the nuclear and chloroplast genomes of a relict tree species in East Asia
负责人:
关键词:
Isolation by spatial distance;isolation by environment;historical climatic stability;spatial genetic patterns;multiple matrix regression with randomization
DOI:
doi:10.5061/dryad.80gb5mknp
摘要:
. Lindera obtusiloba has been found to have two sister genetic clades of chloroplast (cpDNA) and nuclear microsatellite (nSSR), both of which sh

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