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Data from: Level of genetic differentiation affects relative performances of EST- and genomic SSRs
负责人:
关键词:
conservation genetics;Forest Thrush;genetic diversity;population structure;Lesser Antillean Bullfinch;Birds;Cichlherminia lherminieri;molecular markers;Holocene;Plumbeous Warbler
DOI:
doi:10.5061/dryad.0p3j8
摘要:
Microsatellites, also called simple sequence repeats (SSRs) are markers of choice to estimate relevant parameters for conservation genetics, suc
Data from: Cross-species transferability of SSR loci developed from transcriptome sequencing in lodgepole pine
负责人:
关键词:
454;SSR;Pinus ponderosa;EST;Pinus contorta
DOI:
doi:10.5061/dryad.8dk6t78s
摘要:
for the discovery of gene-based molecular markers. In a previous study more than 15 000 simple sequence repeats (SSRs) in expressed sequence tag (EST) sequences res
Data from: Transcriptome-derived tetranucleotide microsatellites and their associated genes from the giant panda (Ailuropoda melanoleuca)
负责人:
关键词:
frameshift Subject area: Conservation genetics and biodiversity;CDS;functional marker;Ailuropoda melanoleuca;transcriptome-derived tetranucleotide microsatellites
DOI:
doi:10.5061/dryad.709d4
摘要:
Recently, an increasing number of microsatellites or Simple Sequence Repeats (SSRs) have been found and characterized from transcriptome. Such SSRs
Data from: Comparative population genetic analysis of bocaccio rockfish Sebastes paucispinis using anonymous and gene-ass
负责人:
Buonaccorsi, Vincent P.
关键词:
comparative genomics marine fisheries stock structure threatened species microsatellite EST-SSR
DOI:
doi:10.5061/dryad.42413173
摘要:
r the past three decades. We used 18 anonymous and 13 gene associated simple sequence repeat loci (EST-SSRs) to characterize range-wide population structure
Data from: Mining microsatellite markers from public expressed sequence tags databases for the study of threatened plants
负责人:
关键词:
population genetics;conservation;Oryza;Arabidopsis;Evolution;functional markers;EST-SSR;threatened plants
DOI:
doi:10.5061/dryad.63h33
摘要:
Background: Simple Sequence Repeats (SSRs) are widely used in population genetic studies but their classical development is costly and time-consuming
Data from: Characterization of microsatellite loci and reliable genotyping in a polyploid plant, Mercurialis perennis (Euphorbiaceae)
负责人:
关键词:
microsatellites;Mercurialis perennis;polyploidy;SSR markers;loci characterization;genotyping errors
DOI:
doi:10.5061/dryad.8887
摘要:
For many applications in population genetics, codominant simple sequence repeats (SSRs) may have substantial advantages over dominant anonymous
Data from: Identification and analysis of novel salt responsive candidate gene based SSRs (cgSSRs) from rice (Oryza sativa L.)
负责人:
关键词:
Microsatellite genic-SSR cgSSR salt tolerance salt responsive gene rice molecular diversity candidate gene rice genotype
DOI:
doi:10.5061/dryad.dj51c
摘要:
detection with important genes if SSRs are developed from candidate genes. To the best of our knowledge, there is no such report on SSR markers development
Data from: Molecular resources from transcriptomes in the Brassicaceae family
负责人:
关键词:
RNAseq\/transcriptome;Sequencing platform;SSRs;molecular resources;data mining;Brassicaceae
DOI:
doi:10.5061/dryad.35k67
摘要:
distributed worldwide and a complex evolutionary history. We performed Simple Sequence Repeats (SSRs) mining using de novo assembled transcriptomes from 19
in Southern Italy revealed by SSR markers
负责人:
关键词:
Olive;Olea europaea;genetic relationships;morphological characterisation;SSRs;Genetic structure
DOI:
doi:10.5061/dryad.3dv00
摘要:
, based on morphological traits, revealed geographic grouping in agreement with UPGMA dendrogram and structure analysis using SSRs. Sicilian cultivars sh
Data from: A linkage disequilibrium perspective on the genetic mosaic of speciation in two hybridizing Mediterranean white oaks
负责人:
关键词:
EST-SSRs;Quercus faginea;Quercus faginea Lamb.;outliers;genomic hitchhiking;Pliocene;Quercus pyrenaica Willd.;genetic mosaic;Quercus;divergence hitchhiking;Quercus pyrenaica;nSSRs;linkage disequilibrium
DOI:
doi:10.5061/dryad.np29h
摘要:
preferences. Ninety expressed sequence tag-simple sequence repeats (EST-SSRs) and eight nuclear SSRs were genotyped in 96 trees from each species. Genotyping

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