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Data from: Efficient detection of repeating sites to accelerate phylogenetic likelihood calculations
- 负责人：
- DOI：
- doi:10.5061/dryad.8f0c8
- 摘要：
- h as phylogenetic inference, species delimitation, model selection and divergence times estimation. Given the alignment, a tree and the evoluti
Data from: Current methods for automated filtering of multiple sequence alignments frequently worsen single-gene phylogenetic inference
- 负责人：
- DOI：
- doi:10.5061/dryad.pc5j0
- 摘要：
- Phylogenetic inference is generally performed on the basis of multiple sequence alignments (MSA). Because errors in an alignment can lead to errors
Data from: Genome-wide RAD sequence data provide unprecedented resolution of species boundaries and relationships in the Lake Victoria cic
- 负责人：
- DOI：
- doi:10.5061/dryad.6300n
- 摘要：
- d in phylogenetic analyses, we produce phylogenetic trees with unprecedented resolution for this group. In trees derived from our largest data supermatrices (3 to >5.8 milli
Data from: Diversity, disparity, and evolutionary rate estimation for unresolved Yule trees
- 负责人：
- DOI：
- doi:10.5061/dryad.2cb46
- 摘要：
- . However, the phylogenetic tree itself contributes statistical uncertainty to estimates of other evolutionary quantities, and many comparative evoluti
Data from: Conservation action based on threatened species capture taxonomic and phylogenetic richness in breeding and wintering populati
- 负责人：
- 关键词：
- conservation;important bird areas;phylogenetic diversity;Threatened species;red lists;Birds;Aves
- DOI：
- doi:10.5061/dryad.q72q4
- 摘要：
- r the phylogenetic tree. However this argument seems to dismiss the fact that conservation action is a spatially explicit process, and even if threatened species ar
Data from: Phylogenomic analyses reveal a deep history of hybridization and polyploidy in the Neotropical genus Lachemilla (Rosaceae)
- 负责人：
- DOI：
- doi:10.5061/dryad.vj2s888
- 摘要：
- for phylogenetic reconstruction. Here, we use sequence capture data and multiple species tree and species network approaches to resolve the backbone phylogeny of the Neotropic
Data from: Characterizing and comparing phylogenies from their Laplacian spectrum
- 负责人：
- DOI：
- doi:10.5061/dryad.60s10
- 摘要：
- a graph-theoretical approach that provides such a framework. We show how to construct the spectral density profile of a phylogenetic tree from its Laplacian
Data from: SuperFine: fast and accurate supertree estimation
- 负责人：
- DOI：
- doi:10.5061/dryad.879st
- 摘要：
- of the estimation of a Tree of Life, containing perhaps as many as several million leaves. These phylogenetic estimations present enormous computational challenge
Data from: The future of evolutionary diversity in reef corals
- 负责人：
- DOI：
- doi:10.5061/dryad.178n3
- 摘要：
- orly known. In this study, we use phylogenetic metrics in conjunction with geographical distributions of living reef coral species to model how extinctions are li
Data from: TreeFix: statistically informed gene tree error correction using species trees
- 负责人：
- DOI：
- doi:10.5061/dryad.44cb5
- 摘要：
- Accurate gene tree reconstruction is a fundamental problem in phylogenetics, with many important applications. However, sequence data alone oft
