Data from: A relaxed directional random walk model for phylogenetic trait evolution

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关键词：

Diffusion Processes;phylogeography;phylogenetics;Phylodynamics;Brownian motion;trait evolution

DOI：

doi:10.5061/dryad.v43rd

摘要：

, and we illustrate its utility in two viral examples. First, we examine the spatiotemporal spread of HIV-1 in central Africa and show that the RDRW model uncovers

Data from: Evidence that hepatitis C virus genome partly controls infection outcome

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关键词：

Biomedicine;Phylogenetic Theory and Methods;Host Parasite Interactions;Evolutionary Medicine;Bioinfomatics\/Phyloinfomatics;Flaviviridae;Disease Biology;Hepacivirus

DOI：

doi:10.5061/dryad.3978f

摘要：

phylogenetic approaches previously developed to estimate the virus control over set-point viral load in HIV-1 infections, we simulate inheritance of a binary

Data from: Cough frequency during treatment associated with baseline cavitary volume and proximity to the airway in pulmonary TB

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关键词：

CT;Tuberculosis;Mycobacteria;cough

DOI：

doi:10.5061/dryad.8pt77k0

摘要：

. The relationship between cough frequency and cavitary lung disease has never been studied. Methods: We analyzed 41 human immunodeficiency virus-negative adults

Data from: Understanding past population dynamics: Bayesian coalescent-based modeling with covariates

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关键词：

population genetics;Gaussian Markov Random Fields;phylogenetics;coalescent;Bayesian inference;Phylodynamics;Evolutionary Biology;effective population size

DOI：

doi:10.5061/dryad.mj0hn

摘要：

of the HIV-1 CRF02_AG clade in Cameroon with HIV incidence and prevalence data and find that the effective population size is more reflective of incidence rate