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Data from: Finding stories in noise: mitochondrial portraits from RAD data
负责人:
关键词:
genotyping-by-sequencing;Labeobarbus natalensis;Genomics\/Proteomics;polyploidy;mitochondrial genome;hybridization;Labeobarbus aeneus;Labeobarbus kimberleyensis;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.75fh336
摘要:
arches and by comparisons with cytochrome b gene sequences obtained through Sanger sequencing. Finally, we investigate the organismal consequences of these data inc
Mesocentrotus franciscanus Genome sequencing and assembly
负责人:
BGI
关键词:
Genome sequencing and assembly Monoisolate
DOI:
doi:10.26036/cnphis0002232
摘要:
animal species was created and used for homology search among the genomic data obtained in this study. Aminoacid sequences of longevity related proteins
Data from: Genotyping-in-Thousands by sequencing (GT-seq) panel development and application to minimally-invasive DNA samples to support studies
负责人:
关键词:
conservation genetics;Reptiles;Non-invasive sampling;Crotalus oreganus;targeted amplicon sequencing;SNP panel;molecular ecology;RAD-seq;Wildlife Management
DOI:
doi:10.5061/dryad.vr300p0
摘要:
for harnessing MPS. Here, we test the ability for Genotyping-in-Thousands by sequencing (GT-seq), a multiplex amplicon sequencing approach, to effectively genotype
Data from: Genetic mapping of millions of SNPs in safflower (Carthamus tinctorius L.) via whole-genome resequencing
负责人:
关键词:
Safflower;Carthamus palaestinus;Genome;Carthamus tinctorius L.
DOI:
doi:10.5061/dryad.635ds
摘要:
Accurate assembly of complete genomes is facilitated by very high density genetic maps. We performed low-coverage, whole-genome shotgun sequencing
Data from: Validation of targeted next-generation sequencing for RAS mutation detection in FFPE colorectal cancer tissues: comparison
负责人:
关键词:
Formalin-fixed paraffin-embedded;Colorectal cancer;Targeted next-generation sequencing;RAS mutations;Ion Torrent Personal Genome Machine
DOI:
doi:10.5061/dryad.3447g
摘要:
in formalin-fixed paraffin-embedded (FFPE) colorectal cancer (CRC) specimens, with comparison of Sanger sequencing and ARMS-Scorpion real-time PCR. Se
Data from: Phased whole-genome genetic risk in a family quartet using a major allele reference sequence
负责人:
关键词:
DOI:
doi:10.5061/dryad.34q0d
摘要:
sequencing error and inform family-wide haplotype phasing, allowing quantification of genome-wide compound heterozygosity. We develop a sequence-base
Data from: Finding the right coverage: The impact of coverage and sequence quality on SNP genotyping error rates
负责人:
关键词:
Mendelian error;Choloepus hoffmanni;genotyping error;single nucleotide polymorphism;Next Generation Sequencing;ddRAD
DOI:
doi:10.5061/dryad.8g470
摘要:
. Here, we estimated genotyping error rates in SNPs genotyped with double digest RAD sequencing from Mendelian incompatibilities in known mother-offspring
Data from: Large-scale genotyping of highly polymorphic loci by next generation sequencing: how to overcome the challenges to reliably genotype individuals?
负责人:
关键词:
post-processing;parentage relationships;Marmota marmota;high throughput sequencing;non-model species;Holocene;Alpine marmot
DOI:
doi:10.5061/dryad.rp7n9
摘要:
ers of individuals. Next-generation sequencing (NGS) techniques enable such large-scale sequencing, but stringent data processing is required. Here, we develop an easy
Data from: Utility of pooled sequencing for association mapping in non-model organisms
负责人:
关键词:
conservation genetics;Genomics\/Proteomics;Oncorhynchus tshawytscha;Evolution of Sex;Fish;Bioinfomatics\/Phyloinfomatics;Adaptation
DOI:
doi:10.5061/dryad.85q6j
摘要:
High density genome-wide sequencing increases the likelihood of discovering genes of major effect and genomic structural variation in organisms
The Pig\u2019s other genome: a reference gene catalogue of the gut microbiome
负责人:
BGI
关键词:
missing Monoisolate
DOI:
doi:10.26036/cnphis0000044
摘要:
Pig is a main species for livestock and biomedicine. The pig genome sequence was recently reported. To boost research, we established a catalogue

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