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Data from: Discovery and evaluation of candidate sex-determining genes and xenobiotics in the gonads of lake sturgeon (Acipenser fulvescens)
负责人:
关键词:
Acipenser fulvescens;polyploidy;Trichomonas;transcriptome;Pyrosequencing 454;Schistosoma
DOI:
doi:10.5061/dryad.q0740kp8
摘要:
on (Acipenser fulvescens). Using 454 pyrosequencing of transcribed genes, we produced more than 125 MB of sequence data from 473,577 high-quality sequencing reads. Sequences
Data from: Geographically-stratified HIV-1 group M pol subtype and circulating recombinant form sequences
负责人:
关键词:
HIV-1;GenBank Search;molecular epidemiology;Subtyping;pol Sequences
DOI:
doi:10.5061/dryad.56j2n
摘要:
molecular epidemiology. Because most HIV-1 sequencing is done for genotypic resistance testing pol gene, we sought to develop a set of geographically-stratified pol
Data from: Evaluating the performance of targeted sequence capture, RNA-Seq, and degenerate-primer PCR cloning for sequencing the largest mammalian
负责人:
关键词:
Genomics\/Proteomics;targeted sequence capture;Transcriptomics;Mammals;olfactory receptor;multigene family
DOI:
doi:10.5061/dryad.179116t
摘要:
s. Molecular analyses of these gene families require high-confidence sequences, but the high sequence similarity of the members can create challenges for sequencing
Data from: Fast and cost-effective genetic mapping in apple using next-generation sequencing
负责人:
关键词:
Malus x domestica
DOI:
doi:10.5061/dryad.55t54
摘要:
Next-generation DNA sequencing (NGS) produces vast amounts of DNA sequence data, but it is not specifically designed to generate data suitable
Data from: The complete sequence of the mitochondrial genome of Butomus umbellatus - a member of an early branching lineage of monocotyledons
负责人:
关键词:
monocots;plant mitochondria;Genome sequencing;Butomus umbellatus
DOI:
doi:10.5061/dryad.42gc4
摘要:
, we are sequencing complete genomes from a suite of key taxa. As a starting point the present paper describes the mitochondrial genome
Data from: Genotype-free estimation of allele frequencies reduces bias and improves demographic inference from RADSeq data
负责人:
关键词:
ANGSD;Ficedula hypoleuca;genotyping error;RADseq;demographic inference;allele frequencies
DOI:
doi:10.5061/dryad.1sd556t
摘要:
e. Estimating the distribution of sample allele frequencies without calling genotypes was shown to improve population inference from whole genome sequencing
Data from: Two low coverage bird genomes and a comparison of reference-guided versus de novo genome assemblies
负责人:
关键词:
Genome;Nucifraga columbiana;Centrocercus minimus;Mitochondria;Clark's Nutcracker;Gunnison Sage-Grouse;low coverage genome sequencing;de novo Assembly;chromosome annotation;reference-guided assembly
DOI:
doi:10.5061/dryad.qn1n2
摘要:
paired-end sequencing to assemble draft genomes of two bird species (the Gunnison Sage-Grouse, Centrocercus minimus, and the Clark's Nutcracker, Nuci
Data from: Chromosome-level reference genome of X12, a highly virulent race of the soybean cyst nematode Heterodera glycines
负责人:
关键词:
Heterodera glycines;X12;Evolution;Soybean cyst nematode;genome assembly;Chromosome scale
DOI:
doi:10.5061/dryad.5b2m501
摘要:
. Increased SCN virulence has recently been observed in both the United States and China. However, no study has reported a genome assembly for H. glycin
Data from: Testing pipelines for genome-wide SNP calling from Genotyping-By-Sequencing (GBS) data for Pinus ponderosa
负责人:
关键词:
pipeline;reference-based;SNP;Pinus ponderosa;de novo;now;GBS
DOI:
doi:10.5061/dryad.6fv8fb4
摘要:
t genomes and their amenability to high-throughput genotyping techniques. Genotyping-by-sequencing (GBS) has been demonstrated to be a robust and cost

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