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Data from: Probabilistic methods outperform parsimony in the phylogenetic analysis of data simulated without a probabilistic model
负责人:
关键词:
Likelihood;morphology;parsimony;Simulation;Bayesian;phylogenetics
DOI:
doi:10.5061/dryad.h8r2629
摘要:
studies have suggested that analyses of morphological character data using the Bayesian and Maximum likelihood Mk model provide phylogenies of higher
Data from: Molecular phylogeny of the horse flies: a framework for renewing tabanid taxonomy
负责人:
关键词:
Jurassic;Paleogene;horse fly;divergence times;phylogeny;Cretaceous;Diptera;Tabanidae
DOI:
doi:10.5061/dryad.tn390
摘要:
, and all major extant groups were present by the early Palaeogene. This newly revised phylogenetic framework for Tabanidae forms the basis for a ne
Data from: Phylogenetics, delimitation and historical biogeography of the pantropical tree genus Thespesia (Malvaceae, Gossypieae)
负责人:
关键词:
Azanza;Biogeography;Paleocene;Eocene;Gossypieae;Thespesia;long-distance dispersal;Oligocene;Eumalvoideae;Thepparatia;phylogenetics;Miocene;Cephalohibiscus;Plio-Pleistocene;Late Cretaceous
DOI:
doi:10.5061/dryad.sv164
摘要:
ll tree of tropical coastal areas around the world. Phylogenetic relationships in the genus and among its allies in tribe Gossypieae were inferred using thr
Data from: A new Bayesian method for fitting evolutionary models to comparative data with intraspecific variation
负责人:
关键词:
Morphological Evolution;phylogenetics;Cyprinidae;Models\/Simulations
DOI:
doi:10.5061/dryad.7fv08k72
摘要:
it takes phenotypic values from individuals and a phylogenetic tree as input, and then samples species means and variances, along with the parameters
Data from: Assessing species boundaries and the phylogenetic position of the rare Szechwan Ratsnake, Euprepiophis perlacea (Serpentes: Colubridae
负责人:
关键词:
species delimitation;Species tree;Euprepiophis perlacea;Coalescence;Gene tree
DOI:
doi:10.5061/dryad.053m3
摘要:
ple individuals and coalescent-based approaches. Species were first delimited using Bayesian Phylogenetics & Phylogeography (BP&P), Brownie and Bayes
Data from: Additional molecular support for the new chordate phylogeny
负责人:
关键词:
Tunicata;chordates;Chordata;Deuterostomia;Hemichordata;Cephalochordata;olfactores;Evolution;Metazoa;tunicates;cephalochordates;Urochordata;deuterostomes;Vertebrata;cyclostomata;ribosomal RNA;Oikopleura;jackknife;Craniata;Phanerozoic;Ciona;phylogenomics;Xenoturbella
DOI:
doi:10.5061/dryad.1850
摘要:
ism. We assembled an expanded phylogenomic dataset focused on deuterostomes. Maximum-likelihood using standard models and Bayesian phylogenetic analyses using the CAT
Data from: Delimitation of the Thoracosphaeraceae (Dinophyceae), including the calcareous dinoflagellates, based on large amounts of ribosomal RNA sequence data
负责人:
关键词:
morphology;SSU;rRNA;calcareous dinoflagellates;ITS;molecular systematics;LSU
DOI:
doi:10.5061/dryad.d1vg6
摘要:
aeraceae. The phylogenetic relationships among calcareous dinophytes appear complex, and the assumption of the single origin of the potential to produce calcareous structures is challenge
Data from: New DNA data from a Transthyretin nuclear intron suggest an Oligocene to Miocene diversification of living South America opossums
负责人:
关键词:
evolutionary dynamics;Didelphidae;Marsupialia;Transthyretin intron 1;molecular systematics;molecular dating;Cenozoic;Mitochondrial and nuclear markers
DOI:
doi:10.5061/dryad.8505
摘要:
Phylogenetic relationships of 19 species of didelphid marsupials were studied using two nuclear markers, the non-coding transthyretin intron 1 (TTR
Data from: Swapping birth and death: symmetries and transformations in phylodynamic models
负责人:
关键词:
Basel;maximum likelihood;phylogenetics;Bayesian inference;Phylodynamics;birth-death models;algebraic symmetries;speciation-extinction models
DOI:
doi:10.5061/dryad.57704ft
摘要:
Stochastic birth--death models provide the foundation for studying and simulating evolutionary trees in phylodynamics. A curious feature of suc

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