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Data from: Bayesian analysis of a morphological supermatrix sheds light on controversial fossil hominin relationships
负责人:
关键词:
Bayesian phylogenetics;Australopithecus sediba;Hominin phylogeny;human evolution;Homo floresiensis
DOI:
doi:10.5061/dryad.5025v
摘要:
w baseline dataset for future work on hominin phylogeny and illustrates the promise of Bayesian approaches for understanding hominin phylogenetic relationships.
Data from: Effective online Bayesian phylogenetics via sequential Monte Carlo with guided proposals
负责人:
关键词:
phylogenetics;sequential Monte Carlo;Online Inference;Bayesian inference
DOI:
doi:10.5061/dryad.n7n85
摘要:
. Current software packages for Bayesian phylogenetic inference are unable to quickly incorporate new sequences as they become available, making them less use
Data from: Concordance analysis in mitogenomic phylogenetics
负责人:
关键词:
Hynobiidae;Plethodontidae;Concatenation;mitogenomics;phylogenetics;Bayesian concordance analysis
DOI:
doi:10.5061/dryad.8d3r7
摘要:
stency in concatenated mitogenomic phylogenetics. The overall results presented here suggest that Bayesian concordance analysis can serve as an effective explorati
Data from: Deflating trees: improving Bayesian branch-length estimates using informed priors
负责人:
关键词:
prior choice;Bayesian phylogenetics;branch lengths
DOI:
doi:10.5061/dryad.1gm13
摘要:
in all circumstances. Branch-length priors are of particular interest for phylogenetics, because they affect many parameters and biologically relevant
Data from: Detection of implausible phylogenetic inferences using posterior predictive assessment of model fit
负责人:
关键词:
Simulation;Markov chain Monte Carlo;Bayesian;phylogenetic;Posterior Predictive Distribution;Sequence Evolution;model fit
DOI:
doi:10.5061/dryad.nc866
摘要:
on is a flexible and intuitive approach for assessing goodness-of-fit of the assumed model and priors in a Bayesian phylogenetic analysis. Here, I propose ne
Data from: Pan-genome and phylogeny of Bacillus cereus sensu lato
负责人:
关键词:
Bayesian model-based clustering;Bacillus cereus group;Bacillus cereus;Bacillus cereus sensu lato;Pan-genome;phylogenetic clustering;Bacillus;phylogenetics;Pan-GWAS;phylogeny
DOI:
doi:10.5061/dryad.dm82j
摘要:
-genome data was included in phylogenetic analyses, as opposed to when only core genes were used. Bayesian population genetic analysis recommended
Data from: Bayesian estimation of fossil phylogenies and the evolution of early to middle Paleozoic crinoids (Echinodermata)
负责人:
关键词:
DOI:
doi:10.5061/dryad.6hb7j
摘要:
phylogenetic relationships among Ordovician through Devonian crinoids using a Bayesian tip-dating approach. Results support several clades recognized in previous analyses
Data from: Assessing combinability of phylogenomic data using Bayes Factors
负责人:
关键词:
Concatenation;marginal likelihood;Bayes factor;Bayes Factor calibration;phylogenetic dissonance;phylogenomics
DOI:
doi:10.5061/dryad.gt81779
摘要:
phylogenetic resolution, it also presents us with new challenges when the phylogenetic signal is confused by differences in the evolutionary histories of sampled
Data from: Assessing parameter identifiability in phylogenetic models using Data Cloning
负责人:
关键词:
Data Cloning;Bayesian estimation in Phylogenetics;Parameter Identifiability;maximum likelihood
DOI:
doi:10.5061/dryad.rr6400b4
摘要:
any Bayesian phylogenetics software to be able to diagnose non-identifiability. Theoreticians and practitioners alike now have a powerful tool to detect non-identifia
Data from: Taxonomic reassessment of Clevosaurus latidens Fraser, 1993 (Lepidosauria, Rhynchocephalia) and rhynchocephalian phylogeny ba
负责人:
关键词:
Eusphenodontia;Triassic;Sphenodontia;Rhynchocephalia;taxonomy;phylogenetics;Norian-Rhaetian;Neosphenodontia;Fraserosphenodon latidens;Paleontology;Lepidosauria
DOI:
doi:10.5061/dryad.9n153
摘要:
using both parsimony and Bayesian approaches. Our taxonomic review and both phylogenetic analyses reveal that C. latidens is not referable

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