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Data from: Digging for DNA at depth: rapid universal metabarcoding surveys (RUMS) as a tool to detect coral reef biodiversity across a depth gradient
负责人:
关键词:
Environmental DNA;Demospongiae;Anthozoa;Environmental DNA;Next-generation sequencing;18S ribosomal DNA;Invertebrate;Demospongiae;Holocene;Marine
DOI:
doi:10.5061/dryad.37qv5rd
摘要:
subtropical biodiversity along a depth gradient at two coral reefs in Okinawa, Japan based on 18S rRNA. Results. Using 18S rRNA metabarcoding, we found tha
Data from: Identification of habitat-specific biomes of aquatic fungal communities using a comprehensive nearly full-length 18S rRNA dataset enriched
负责人:
关键词:
phylogenetic signals;habitat-specific patterns;habitat;contextual data;marine fungi;molecular phylogeny;18S rRNA gene;community;aquatic fungi;phylogenetic beta-diversity
DOI:
doi:10.5061/dryad.7fv64
摘要:
l publicly available fungal 18S ribosomal RNA (rRNA) gene sequences with new sequence data from a marine fungi culture collection. We further enriched
Data from: Fitness and microbial networks of the common wasp, Vespula vulgaris (Hymenoptera: Vespidae), in its native and introduced range
负责人:
Gruber, Monica A. M.
关键词:
18S ecological networks microbiota invasive species 16S
DOI:
doi:10.5061/dryad.3ds9484
摘要:
, immune gene expression, and microbial network complexity of invasive common wasps, Vespula vulgaris. Microbial networks were assayed using 16S and 18S sequencing
Data from: Phylogenetic affiliation of SSU rRNA genes generated by massively parallel sequencing: new insights into the freshwater protist diversity
负责人:
关键词:
Protozoa;protist
DOI:
doi:10.5061/dryad.66hc3
摘要:
t of this work, a tree-based method was compared with different approaches of taxonomic affiliation (BLAST and RDP) of 18S rRNA gene sequences and was shown to be the mos
Data from: Unraveling the evolutionary radiation of the families of the Zingiberales using morphological and molecular evidence
负责人:
关键词:
tropical;Zingiberales;morphology;atpB;fossils;phylogeny;rbcL;18S;monocots
DOI:
doi:10.5061/dryad.705
摘要:
s: 1) morphological features; and sequence data of the 2) chloroplast rbcL gene; 3) chloroplast atpB gene; and 4) nuclear 18S rDNA gene. Outgroups for the analyses inc
Data from: Phylogenetics of flowering plants based on combined analysis of plastid atpB and rbcL gene sequences
负责人:
关键词:
large molecular datasets;complex phylogenies;Angiosperm;atpB;rbcL
DOI:
doi:10.5061/dryad.564
摘要:
. Missouri Bot. Gard. 80: 528-580) and (2) the 18S nuclear phylogeny of flowering plants (published in 1997 by Soltis et al., Ann. Missouri Bot. Gard. 84: 1-49
Data from: 18S rRNA metabarcoding diet analysis of the predatory fish community across seasonal changes in prey availability
负责人:
关键词:
freshwater fishes;Metabarcoding;Diet Analysis
DOI:
doi:10.5061/dryad.0jm1dt2
摘要:
molecular techniques using genetic data can provide more accurate estimates of relative diet composition. This study used sequences from the 18S V9 rRNA barcoding
Data from: Seasonal diversity and dynamics of haptophytes in the Skagerrak, Norway, explored by high-throughput sequencing
负责人:
关键词:
Environmental DNA;metagenomics;Protists;Microbial Biology;Pavlovophyceae;Prymnesiophyceae;haptophytes;Bioinfomatics\/Phyloinfomatics;Haptophyta;population dynamics
DOI:
doi:10.5061/dryad.b8d21
摘要:
monthly for 2 years, and the haptophytes targeted by amplification of RNA/cDNA with Haptophyta-specific 18S rDNA V4 primers. We obtained 156
Data from: Phylogeny of Tetillidae (Porifera, Demospongiae, Spirophorida) based on three molecular markers
负责人:
关键词:
Tetilla;morphology;Cinachyrella;Fangophilina;Spirophorida;Acanthotetilla;cox1;taxonomy;Extant;Paratetilla;Amphitethya;Porifera;Cinachyra;18S rRNA;28S rRNA;phylogenetics;Tetillidae;Craniella
DOI:
doi:10.5061/dryad.10gh5
摘要:
. The phylogeny of tetillid genera was investigated using the cox1, 18S rRNA and 28S rRNA (C1-D2 domains) genes in 88 specimens (8 genera, 28 species). Five clades
Data from: Phylogenetic signal in mitochondrial and nuclear markers in sea anemones (Cnidaria, Actiniaria)
负责人:
Daly, Marymegan
关键词:
hexacoral DNA molecular phylogeny
DOI:
doi:10.5061/dryad.1563
摘要:
. Among the markers studied here, the fragments of 12S rDNA and 18S rDNA most effectively recover well-supported nodes; those of 16S rDNA and 28S rDNA ar

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