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Data from: Amplicon pyrosequencing late Pleistocene permafrost: the removal of putative contaminant sequences and small-scale reproducibility
负责人:
Porter, Teresita
关键词:
ancient DNA contamination reproducibility barcoding Beringia amplicon pyrosequencing
DOI:
doi:10.5061/dryad.4m7d1
摘要:
karyote 16S rDNA, mitochondrial cox1 and chloroplast trnL intron) from two soil cores sampled 10 cm apart. In addition, sequenced control reactions were use
Data from: Assemblage Accumulation Curves: A framework for resolving species accumulation in biological communities using chloroplast genome sequences
负责人:
关键词:
Quaternary;Community Ecology;molecular dating;assemblage
DOI:
doi:10.5061/dryad.4rn1q84
摘要:
from whole?chloroplast sequencing, this framework can be applied to mitochondrial genomes and to communities of other organisms.
Data from: Phylogeny and photosynthesis of the grass tribe Paniceae
负责人:
关键词:
chloroplast C4 NAD-ME NADP-ME PCK photosynthesis
DOI:
doi:10.5061/dryad.92137
摘要:
(78 chloroplast, 22 mitochondrial, 2 nrDNA). Ancestral state reconstruction analyses were also performed within the Paniceae using both the traditional
Data from: Identifying genetic markers for a range of phylogenetic utility–from species to family level
负责人:
关键词:
locus selection;Eucalyptus;marker discovery;Next-generation sequencing;exon capture;phylogeny;Melaleuca;Mytraceae
DOI:
doi:10.5061/dryad.p20km22
摘要:
that allows identification of many low copy candidate loci from across the nuclear and chloroplast genomes, design probes for target capture
Data from: A worldwide molecular phylogeny provides new insight on cryptic diversity within the moonworts (Botrychium s. s., Ophioglossaceae)
负责人:
关键词:
Fern;Botrychium;Ophioglossaceae;molecular phylogeny;moonwort;polyploid
DOI:
doi:10.5061/dryad.tc07j
摘要:
), as well as phylogenetic resolution by including additional new chloroplast markers. To confirm identification and provide evidence from both maternal and paternal parent
Data from: From ratites to rats: the size of fleshy fruits shapes species' distributions and continental rainforest assembly
负责人:
关键词:
Dispersal;fruit size;chloroplast genome;Rainforest assembly;Next Generation Sequencing
DOI:
doi:10.5061/dryad.rm5dr
摘要:
with large fleshy fruits and their dispersers across an entire continental rainforest biome. We compare species-level results of whole-chloroplast
Data from: Next-generation sequencing to inventory taxonomic diversity in eukaryotic communities: a test for freshwater diatoms
负责人:
关键词:
DNA Barcoding;metagenomics;Bacillariophyta;diatoms;Algae;Community Ecology
DOI:
doi:10.5061/dryad.370nq
摘要:
with an available DNA reference library. We used three molecular markers targeting the nuclear, chloroplast and mitochondrial genomes (SSU rDNA, rbcL, and cox1

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