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Data from: Single-molecule imaging correlates decreasing nuclear volume with increasing TF-chromatin associations during zebrafish development
负责人:
关键词:
DOI:
doi:10.5061/dryad.g154580
摘要:
gely unknown. We establish single molecule tracking in live developing zebrafish embryos using reflected light-sheet microscopy to visualize two fluorescently
Data from: A first look at the Oxford Nanopore MinION sequencer
负责人:
关键词:
Genomics\/Proteomics;nanopore sequencing;Next-generation sequencing;bioinformatics;Protobothrops flavoviridis
DOI:
doi:10.5061/dryad.5p0c3
摘要:
Oxford Nanopore's third-generation, single-molecule sequencing platform promises to decrease costs for reagents and instrumentation. After a two-yea
Data from: Recombination-dependent replication and gene conversion homogenize repeat sequences and diversify plastid genome structure
负责人:
关键词:
replication;chloroplast genome inverted repeats plastome ptDNA RDR recombination replication unit-genome;RDR;ptDNA;recombination;Chloroplast;Plastome;inverted repeats;Monsonia;unit-genome
DOI:
doi:10.5061/dryad.p34h3
摘要:
copy regions, but also an array of alternative sequence arrangements. METHODS: We used Illumina paired-end and PacBio single-molecule real-time (SMRT
Data from: Simulation assisted analysis of the intrinsic stiffness for short DNA molecules imaged with scanning atomic force microscopy
负责人:
关键词:
single-molecule;DNA;AFM;biophysics
DOI:
doi:10.5061/dryad.5vd61
摘要:
to the organization of nucleosomes. Scanning atomic force microscopy (AFM) is able to acquire images of single DNA molecules with near-basepair resolution. From ma
Data from: Multicopy single-stranded DNA directs intestinal colonization of enteric pathogens
负责人:
关键词:
Salmonella;Salmonella enterica ssp. Enterica serotype Typhimurium;intestine;mouse model;retron;St-85;proteome
DOI:
doi:10.5061/dryad.ph81m
摘要:
Multicopy single-stranded DNAs (msDNAs) are hybrid RNA-DNA molecules encoded on retroelements called retrons and produced by the action of retron
Data from: Compensatory evolution in RNA secondary structures increases substitution rate variation among sites
负责人:
关键词:
RNA secondary structure;compensatory evolution;transition-transversion ratio;molecular evolution
DOI:
doi:10.5061/dryad.162
摘要:
the model assumption that the underlying transition (or transversion) mutation rates were identical in paired and unpaired regions of the molecule. We explore
Data from: Modelling dynamics in protein crystal structures by ensemble refinement
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关键词:
DOI:
doi:10.5061/dryad.5n01h
摘要:
Single-structure models derived from X-ray data do not adequately account for the inherent, functionally important dynamics of protein molecules
Data from: Live-cell single particle imaging reveals the role of RNA polymerase II in histone H2A.Z eviction
负责人:
关键词:
Baltimore;Single molecule imaging;Saccharomyces cerevisiae
DOI:
doi:10.5061/dryad.43cp80c
摘要:
is deposited by the SWR1 chromatin remodeler and evicted by unclear mechanisms. We tracked H2A.Z in living yeast at single-molecule resolution, and found tha
Data from: Inclusive taxon sampling suggests a single, stepwise origin of ectolecithality in Platyhelminthes
负责人:
关键词:
Recent;Euneoophora;Platyhelminthes;implied weighting;Gnosonesimida;Lecithoepitheliata;Neoophora;heterotachy;phylogenetics;mixture model;Prorhynchida
DOI:
doi:10.5061/dryad.nh31f
摘要:
in taxon sampling. Accordingly, we present a molecular phylogeny focused on resolving the deepest divergences among the free-living Platyhelminthes. Species wer

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