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Data from: Cross-species transferability of SSR loci developed from transcriptome sequencing in lodgepole pine
负责人:
关键词:
454;SSR;Pinus ponderosa;EST;Pinus contorta
DOI:
doi:10.5061/dryad.8dk6t78s
摘要:
s for the discovery of gene-based molecular markers. In a previous study more than 15 000 simple sequence repeats (SSRs) in expressed sequence tag (EST) sequences res
Data from: Genetic structure and demographic history of the endangered tree species Dysoxylum malabaricum (Meliaceae) in Western Ghats, India
负责人:
关键词:
DOI:
doi:10.5061/dryad.g2b10
摘要:
ss the impact of human activities on genetic diversity and infer the species’ evolutionary history, using both nuclear and chloroplast (cp) DNA simple sequence repeats (SSR). As genetic diversi
Data from: The plover neurotranscriptome assembly: transcriptomic analysis in an ecological model species without a reference genome
负责人:
关键词:
Charadrius alexandrinus;de novo transcriptome assembly;behavioural transcriptomics;Neurogenomics;SNP discovery;sex-biased gene expression
DOI:
doi:10.5061/dryad.23vp5
摘要:
, we identified >31 000 high-quality SNPs and > 2500 simple sequence repeats (SSRs). We also analysed expression patterns in our data to identify potential
Data from: Level of genetic differentiation affects relative performances of EST- and genomic SSRs
负责人:
关键词:
conservation genetics;Forest Thrush;genetic diversity;population structure;Lesser Antillean Bullfinch;Birds;Cichlherminia lherminieri;molecular markers;Holocene;Plumbeous Warbler
DOI:
doi:10.5061/dryad.0p3j8
摘要:
Microsatellites, also called simple sequence repeats (SSRs) are markers of choice to estimate relevant parameters for conservation genetics, suc
Data from: Nuclear and chloroplast DNA phylogeography reveals Pleistocene divergence and subsequent secondary contact of two genetic linea
负责人:
关键词:
climate change;Shorea parvifolia;phylogeography;Shorea leprosula;Dipterocarpaceae;Holocene;population dynamics;Population Genetics - Empirical;Pleistocene
DOI:
doi:10.5061/dryad.1mt1h
摘要:
s of a widespread dipterocarp species, Shorea leprosula. Two types of DNA markers were used: expressed sequence tag-based simple sequence repeats (EST-SSRs
Data from: Repetitive DNA profiles reveal evidence of rapid genome evolution and reflect species boundaries in ground beetles
负责人:
关键词:
copy number variation profiles;species delimitation;Bembidion;rapid genome evolution;ribosomal DNA;Carabidae
DOI:
doi:10.5061/dryad.q2t3f27
摘要:
. We confirm that CNV profiles represent an aspect of genomic architecture (i.e., the linear distribution of rDNA components across the genome) via fluorescence in-si
Data from: RUNX2 tandem repeats and the evolution of facial length in placental mammals
负责人:
关键词:
Placentalia;Comparative Methods;Mammalia;mammalian evolution;morphology;Afrotheria;Primates;Xenarthra;prognathism;molecular evolution
DOI:
doi:10.5061/dryad.fr84hd25
摘要:
BACKGROUND: When simple sequence repeats are integrated into functional genes, they can potentially act as evolutionary 'tuning knobs', supplying
Data from: Molecular resources from transcriptomes in the Brassicaceae family
负责人:
关键词:
RNAseq\/transcriptome;Sequencing platform;SSRs;molecular resources;data mining;Brassicaceae
DOI:
doi:10.5061/dryad.35k67
摘要:
distributed worldwide and a complex evolutionary history. We performed Simple Sequence Repeats (SSRs) mining using de novo assembled transcriptomes from 19
Data from: Dissimilarity of individual microsatellite profiles under different mutation models: empirical approach
负责人:
关键词:
microsatellite genotypes;Blumeria graminis;Cristatella mucedo;one year;Puccicnia triticina;mutation models;Puccinia triticina;genetic dissimilarity
DOI:
doi:10.5061/dryad.1b8n2b4
摘要:
Microsatellites (simple sequence repeats, SSRs) still remain popular molecular markers for studying neutral genetic variation. Two alternative

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