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Data from: Mining of expressed sequence tag libraries of cacao for microsatellite markes using five computational tools
- 负责人:
- DOI:
- doi:10.5061/dryad.179
- 摘要:
Data from: SSR_pipeline: a bioinformatic infrastructure for identifying microsatellites from paired-end Illumina high-throughput DNA sequencing data
- 负责人:
- DOI:
- doi:10.5061/dryad.n65k2
- 摘要:
- SSR_pipeline is a flexible set of programs designed to efficiently identify simple sequence repeats (e.g., microsatellites) from paired-end high
Data from: Rapid microsatellite isolation from a butterfly by de novo transcriptome sequencing: performance and a comparison with AFLP-derived
- 负责人:
- DOI:
- doi:10.5061/dryad.1540
- 摘要:
- ). PRINCIPAL FINDINGS: By searching the assembled sequence data for perfect microsatellite repeats we found 10 polymorphic loci. Although, like ma
Data from: Genome-wide identification of microsatellites and transposable elements in the dromedary camel genome using whole genome sequencing data
- 负责人:
- DOI:
- doi:10.5061/dryad.10h185k
- 摘要:
- Transposable elements (TEs) along with simple sequence repeats (SSRs) are prevalent in eukaryotic genome, especially in mammals. Repetitive sequences
Data from: Mining microsatellite markers from public expressed sequence tags databases for the study of threatened plants
- 负责人:
- DOI:
- doi:10.5061/dryad.63h33
- 摘要:
- Background: Simple Sequence Repeats (SSRs) are widely used in population genetic studies but their classical development is costly and time-consuming
Data from: Lessons learned from microsatellite development for non-model organisms using 454 pyrosequencing
- 负责人:
- DOI:
- doi:10.5061/dryad.22p7m
- 摘要:
- Microsatellites, also known as simple sequence repeats (SSRs), are among the most commonly used marker types in evolutionary and ecological studies
Resources Notes Accepted 1 June 2015 to 31 July 2015
- 负责人:
- DOI:
- doi:10.5061/dryad.3rg62
- 摘要:
- were discovered. In all, 479 putative SNPs and 1,624 simple sequence repeats (SSRs) suitable for genotyping were identified. A subset of 96 was se
sequencing of two non-model bat species impacted by wind turbine" data-category="" data-cropid="" data-dimen="" data-id="b4414040-f979-11ea-ae96-0242ac110002"> Data from: "Genome-wide microsatellite marker development from next-generation sequencing of two non-model bat species impacted by wind turbine
- 负责人:
- DOI:
- doi:10.5061/dryad.70254
- 摘要:
- d bioinformatics searches to identify tends of thousands of simple sequence repeats (SSRs) distributed across the bat genome. We selected 48 candidate
Data from: No evidence that sex and transposable elements drive genome size variation in evening primroses
- 负责人:
- DOI:
- doi:10.5061/dryad.7mf4k
- 摘要:
- eproductive system, we found that genome size was not associated with transposable element abundance; instead the larger genomes had a higher abundance of simple sequence repeats
Data from: Rapid microsatellite marker development for African mahogany (Khaya senegalensis, Meliaceae) using next-generation sequencing
- 负责人:
- DOI:
- doi:10.5061/dryad.s03t592c
- 摘要:
- . The assembled sequences contained 1030 simple sequence repeats, with primers designed for 522 microsatellite loci. Twenty one microsatellite loci were tested