Data from: Detection and decay rates of prey and prey symbionts in the gut of a predator through metagenomics

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关键词：

mtDNA;coccinellid;nuclear genome;Harmonia axyridis;analyte detectability period;gut content;Cenozoic;Acyrthosiphon pisum;analyte detectability half-life;aphid

DOI：

doi:10.5061/dryad.n6278

摘要：

. and Serratia symbiotica showed an unexpected temporary increase in population size by 1–2 orders of magnitude in the predator guts before declining. Metagenomics

Data from: Shotgun microbial profiling of fossil remains

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关键词：

Environmental DNA;metagenomics;bacteria;Ecological Genetics

DOI：

doi:10.5061/dryad.r0056

摘要：

the fossils recently. Our approach significantly extends the amount of useful data that can be recovered from ancient specimens using a shotgun

Data from: Characterizing DNA preservation in degraded specimens of Amara alpina (Carabidae: Coleoptera)

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关键词：

metagenomics;Late Pleistocene;Quaternary;Coleoptera;Insecta;shotgun sequencing;Carabidae;ancient DNA;Recent;DNA preservation;Wolbachia;museum DNA;Spiroplasma;Holocene;Amara alpina

DOI：

doi:10.5061/dryad.0179t

摘要：

e significantly longer than those of nuclear DNA in both museum and ancient specimens. Metagenomic characterisation of extracted DNA demonstrated tha

Data from: SPIKEPIPE: a metagenomic pipeline for the accurate quantification of eukaryotic species occurrences and intraspecific abundance change usi

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关键词：

Spilogona novaesibiriae;Gonarcticus arcticus;biomonitoring;Mitogenomes;Insecta;Helophilus lapponicus;Spilogona almqvistii;Araneae;Peleteria aenea;Helophilus groenlandicus;COI internal standard;Drymeia segnis;mitogenomics;Spilogona micans;Spilogona megastoma;Scathophaga apicalis;Community composition;Limnophora groenlandica;Pardosa glacialis;DNA Barcoding;Zaphne occidentalis;Parasyrphus tarsatus;Eutrichota tunicata;Platycheirus groenlandicus;Syrphus torvus;metagenomics;Lophosceles minimus;Arthropoda;Spilogona monacantha;Holocene;Scathophaga nigripalpis

DOI：

doi:10.5061/dryad.r105t1f

摘要：

l biomonitoring. We resolve this challenge by combining shotgun sequencing, mapping to reference DNA barcodes or to mitogenomes, and three correction factors

Searching For Anthrax In The New York City Subway Metagenome.

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关键词：

metagenome NYC subway system anthrax bioinformatics

DOI：

doi:10.5281/zenodo.17158

摘要：

published¹ an in-depth analysis of metagenomic² data(environmental shotgun DNA sequence) from samples isolated from public surfaces

Data from: Oral microbiomes from hunter-gatherers and traditional farmers reveal shifts in commensal balance and pathogen load linked to diet

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关键词：

metagenomics;hunter-gatherers;oral microbiome;diet

DOI：

doi:10.5061/dryad.sn00q

摘要：

, as documented by the oral microbiome. To control for confounding variables such as environment and host genetics, we sampled saliva from three pairs