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Data from: Comparing the effectiveness of metagenomics and metabarcoding for diet analysis of a leaf-feeding monkey (Pygathrix nemaeus)
负责人:
关键词:
Environmental DNA;Pygathrix nemaeus;colobines;feces;shotgun sequencing
DOI:
doi:10.5061/dryad.99dj8
摘要:
, but the barcodes were too short to identify several diet plants to genus. Metagenomics could utilize multiple, longer barcodes that combined had greater power
Data from: Shotgun mitogenomics across body size classes in a local assemblage of tropical Diptera: phylogeny, species diversity and mi
负责人:
关键词:
species richness;mitochondrial metagenomics;metabolic rates;phylogenetic diversity;Neutral Theory of biodiversity;rarity
DOI:
doi:10.5061/dryad.nm948
摘要:
Mitochondrial genomes can be assembled readily from shotgun-sequenced DNA mixtures of mass-trapped arthropods (“mitochondrial metagenomics
Data from: Validating the power of mitochondrial metagenomics for community ecology and phylogenetics of complex assemblages
负责人:
关键词:
Diversity assessment;beta diversity;leaf beetle;Chrysomelidae;Mitometagenomics;biodiversity monitoring;Coleoptera;phylobeta;2010;species inventory;genome skimming
DOI:
doi:10.5061/dryad.3rh21
摘要:
bioinformatics assembly of mitochondrial genomes. Here, we tested the power of mitochondrial metagenomics by conducting Illumina sequencing on mixtures of >2600
Data from: Potential and pitfalls of eukaryotic metagenome skimming: A test case for lichens
负责人:
关键词:
symbiosis;Lasallia pustulata;metagenomics;Bioinfomatics;Asterochloris sp.;Cladonia grayi;genomics;lichen;genome assembly
DOI:
doi:10.5061/dryad.8h95q
摘要:
Whole genome shotgun sequencing of multi species communities using only a single library layout is commonly used to assess taxonomic
Data from: Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the United States
负责人:
关键词:
Verrucomicrobia;metagenomics;Microbiology;bacteria;soil;Holocene
DOI:
doi:10.5061/dryad.3v39m
摘要:
s in the relative abundance of Verrucomicrobia, a poorly studied bacterial phylum that appears to dominate many prairie soils. Shotgun metagenomic data suggested that these
Data from: Cross-biome metagenomic analyses of soil microbial communities and their functional attributes
负责人:
关键词:
shotgun metagenomics soil microbial ecology 16S rRNA gene sequencing biogeography
DOI:
doi:10.5061/dryad.q2n78
摘要:
pool of living biomass in terrestrial ecosystems. We used metagenomic sequencing to compare the composition and functional attributes of 16
Data from: The impact of tropical forest logging and oil palm agriculture on the soil microbiome
负责人:
关键词:
Environmental DNA;metagenomics;bacteria;Agriculture;Community Ecology
DOI:
doi:10.5061/dryad.17n4d
摘要:
microbiome to these land-use changes are poorly understood. Using 16S rRNA gene and shotgun metagenomic sequencing, we compared composition
Data from: Auxotrophy and intra-population complementary in the 'interactome' of a cultivated freshwater model community
负责人:
关键词:
Genomics\/Proteomics;Population Ecology;bacteria;Community Ecology
DOI:
doi:10.5061/dryad.8f230
摘要:
ng a mixed culture from Lake Grosse Fuchskuhle. From a single shotgun metagenome of a freshwater mixed culture of low complexity, we recovered four high-quality
Data from: Metabarcoding and mitochondrial metagenomics of endogean arthropods to unveil the mesofauna of the soil
负责人:
关键词:
Soil biodiversity;Mesofauna;Next Generation Sequencing
DOI:
doi:10.5061/dryad.5t5s1
摘要:
of arthropod communities from these bulk DNA extractions using cox1 metabarcoding and shotgun metagenomic sequencing on the MiSeq Illumina platform. The FBF protocol
Data from: Soil microbiome responses to the short-term effects of Amazonian deforestation
负责人:
关键词:
slash-and-burning;metagenomics;tropical rainforest;bacterial networks;soil microbial ecology;16S rRNA gene
DOI:
doi:10.5061/dryad.071p0
摘要:
microbiome is not known. Using next generation sequencing of 16S rRNA gene and shotgun metagenomic DNA, we compared the structure and the potential functions

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