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Data from: Targeted re-sequencing of five Douglas-fir provenances reveals population structure and putative target genes of positive selection
负责人:
关键词:
Exome Capture;population structure;admixture;positive selection;Pseudotsuga menziesii
DOI:
doi:10.5061/dryad.14ns8
摘要:
transcripts (PUTs) to enrich genomic sequencing libraries for these regions. Sequence analysis revealed that almost 100 % of target regions were capt
Data from: Identifying genetic markers for a range of phylogenetic utility–from species to family level
负责人:
关键词:
locus selection;Eucalyptus;marker discovery;Next-generation sequencing;exon capture;phylogeny;Melaleuca;Mytraceae
DOI:
doi:10.5061/dryad.p20km22
摘要:
ly, we identified 212 loci representing 263 kbp for targeted sequence capture and sequencing. Of these, 209 were successfully tested from 47 samples across five
Data from: Development of highly reliable in silico SNP resource and genotyping assay from exome capture and sequencing: an example from black spruce
负责人:
关键词:
Environmental DNA;Species Interactions;Bioinfomatics\/Phyloinfomatics;Gymnosperms
DOI:
doi:10.5061/dryad.tr87v
摘要:
d transcriptome of Picea glauca, a distant relative. A high capture efficiency of 75.9% was reached although spruce has a complex and large genome including gene sequences
Data from: Dense infraspecific sampling reveals rapid and independent trajectories of plastome degradation in a heterotrophic orchid complex
负责人:
关键词:
mycoheterotroph;plastid genome;Corallorhiza involuta;Corallorhiza bentleyi;Parasite;hybrid capture;Corallorhiza striata;pseudogenization;Corallorhiza
DOI:
doi:10.5061/dryad.g1d2s
摘要:
. By combining genome skimming and targeted sequence capture, we address hypotheses on the degree and rate of plastome degradation in a complex of leafless orchids
Data from: A high-density exome capture genotype-by-sequencing panel for forestry breeding in Pinus radiata
负责人:
关键词:
Exome Capture;genotypes;read depth;Pinus radiata
DOI:
doi:10.5061/dryad.03c7292
摘要:
is achieved. Using a transcriptome-based reference template, we have successfully developed a high density exome capture genotype-by-sequencing panel
Data from: Targeted re-sequencing of coding DNA sequences for SNP discovery in non-model species
负责人:
关键词:
conservation genetics;genetic monitoring;CDS;Eurasian lynx;Lynx lynx;single-nucleotide polymorphism;hybridization capture
DOI:
doi:10.5061/dryad.3f4jr01
摘要:
Targeted capture coupled with high throughput sequencing can be used to gain information about nuclear sequence variation at hundreds to thousands
Data from: Sequence capture phylogenomics of historical ethanol-preserved museum specimens: unlocking the rest of the vault
负责人:
关键词:
museum collections;degraded DNA;Opiliones;ultraconserved elements;ethanol preservation;phylogenomics
DOI:
doi:10.5061/dryad.sh5b962
摘要:
genetics-based studies. Sequence capture methods have proven incredibly useful for phylogenomics, providing the additional ability to sequence historical
Data from: HyRAD-X, a versatile method combining exome capture and RAD sequencing to extract genomic information from ancient DNA
负责人:
关键词:
anthropogenic perturbations;subfossils;time series.;genetic diversity;Abies alba;exome reduction;population genomics;ancient DNA;Holocene;hybridization capture;RAD sequencing
DOI:
doi:10.5061/dryad.m94f4
摘要:
ntation of the exome, further used to capture homologous DNA from a samples set. In contrast to previous hybridization-capture methods, the reference catalog on which
Data from: Inferring the timing of long-distance dispersal between Rail metapopulations using genetic and isotopic assignments
负责人:
关键词:
Discriminant function analysis;microsatellites;Dispersal;stable isotopes;connectivity;Population assignments;Laterallus jamaicensis coturniculus
DOI:
doi:10.5061/dryad.27mk2
摘要:
as: residents of their capture population, recent migrants that dispersed to their capture population less than one year before capture, established migrants tha
Data from: Choice of capture and extraction methods affect detection of freshwater biodiversity from environmental DNA
负责人:
关键词:
metazoan eukaryote;molecular protocols;eubacteria;Freshwater;cytochrome c oxidase I;eDNA;16S;targeted species detection
DOI:
doi:10.5061/dryad.7q19c
摘要:
) for eukaryotes. Protocol combinations for capture and extraction of eDNA significantly influenced DNA yield and number of sequences obtained from

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