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Data from: Sequence Capture using PCR-generated Probes (SCPP): a cost-effective method of targeted high-throughput sequencing for non-model organisms
负责人:
关键词:
sequence capture;Passeriformes;phylogeography;Draco;high-throughput sequencing;phylogenomics;Enyalius
DOI:
doi:10.5061/dryad.rk204
摘要:
erest. The sequence capture using PCR-generated probes (SCPP) protocol requires no specialized equipment, is highly flexible, and significantly reduces experimental
Data from: Mitochondrial capture enriches mito-DNA 100 folds enabling PCR-free mitogenomics biodiversity analysis
负责人:
关键词:
mitogenomics;mitochondrial genome;gene capture;biodiversity
DOI:
doi:10.5061/dryad.19nf6
摘要:
demanding on computing resources. Here, we present a mitogenome enrichment pipeline via a gene capture chip that was designed by virtue of the mitogenome sequences
Data from: Comparison of taxon-specific versus general locus sets for targeted sequence capture for plant phylogenomics
负责人:
关键词:
Lamiales;PPR genes;hybrid enrichment;Scrophulariaceae;single-copy nuclear genes;Buddleja;Buddleja globosa
DOI:
doi:10.5061/dryad.v6q0p
摘要:
Premise of the study: Targeted sequence capture can be used to efficiently gather sequence data for large numbers of loci, such as single-copy
Data from: Sequence capture versus restriction site associated DNA sequencing for shallow systematics
负责人:
关键词:
allele frequency spectrum;Coalescent methods;Next-generation sequencing;ultraconserved elements;Xenops minutus;Birds;concordance analysis;massively parallel sequencing
DOI:
doi:10.5061/dryad.604b8
摘要:
Sequence capture and restriction site associated DNA sequencing (RAD-Seq) are two genomic enrichment strategies for ap
Data from: Exon capture phylogenomics: efficacy across scales of divergence
负责人:
关键词:
Reptiles;Genomics\/Proteomics;skinks;Phylogenetic Theory and Methods;Bioinfomatics\/Phyloinfomatics;Eugongylus
DOI:
doi:10.5061/dryad.34274
摘要:
st recruiting short sequencing reads having homology to the corresponding protein sequence. In sum, custom exon capture provides a complement to existing, mor
Data from: Evaluating the performance of targeted sequence capture, RNA-Seq, and degenerate-primer PCR cloning for sequencing the largest mammalian
负责人:
关键词:
Genomics\/Proteomics;targeted sequence capture;Transcriptomics;Mammals;olfactory receptor;multigene family
DOI:
doi:10.5061/dryad.179116t
摘要:
ee approaches, detecting 50% of the annotated genomic ORs, and targeted sequence capture recovered nearly 75% of annotated genes. Each sequencing ap
Data from: Next-generation museum genomics: phylogenetic relationships among palpimanoid spiders using sequence capture techniques (Araneae
负责人:
关键词:
Mecysmaucheniidae;Araneomorphae;Huttoniidae;Stenochilidae;Palpimanidae;Archaeidae;ultra conserved elements;exon;ethanol
DOI:
doi:10.5061/dryad.387c58v
摘要:
nt target capture sequencing techniques to sequence both Ultra-Conserved Elements (UCE) and exonic regions for lineages that span the modern spiders
Data from: RADcap: sequence capture of dual-digest RADseq libraries with identifiable duplicates and reduced missing data
负责人:
关键词:
Target Enrichment;Reduced Representation Libraries;3RAD;ddRAD;Wisteria;Illumina
DOI:
doi:10.5061/dryad.ss6c9
摘要:
methods, such as restriction site associated DNA sequencing (RADseq) and sequence capture, are constrained by costs associated with inefficient use

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