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Data from: Evaluating hybridization capture with RAD probes as a tool for museum genomics with historical bird specimens
负责人:
关键词:
sequence capture;Anthropocene;hyRAD;RADseq;ancient DNA;Syma torotoro;museum genomics
DOI:
doi:10.5061/dryad.r7q86
摘要:
in a restriction site-associated double digestion as the basis for probes that capture orthologous loci in samples of interest. While promising in that it does
Data from: Evolutionary genomics of gypsy moth populations sampled along a latitudinal gradient
负责人:
关键词:
Evolutionary genomics;double digest restriction-site associated DNA sequencing;polygenic adaptation;genome-wide associations;ddRADseq;Lymantria dispar
DOI:
doi:10.5061/dryad.8ts2867
摘要:
. We generated genotype data for 91,468 single nucleotide polymorphisms (SNPs) based on double digest restriction-site associated DNA sequencing (ddRADse
Data from: Restriction site-associated DNA sequencing generates high-quality single nucleotide polymorphisms for assessing hybridization bet
负责人:
关键词:
SNP;Quaternary;Asian carp;hybridization;Hypophthalmichthys nobilis;Hypophthalmichthys molitrix;introgression;invasive species;RAD sequencing
DOI:
doi:10.5061/dryad.5j2v6
摘要:
-associated DNA (RAD) sequencing of 45 barcoded bighead and silver carp from the United States and China produced reads that were aligned
Data from: TERAD: Extraction of transposable element composition from RADseq data
负责人:
关键词:
Synalpheus;bioinformatics;mobile genetic element;genome size;ddRADseq
DOI:
doi:10.5061/dryad.2375033
摘要:
e, we utilize restriction site associated DNA sequencing (RADSeq) as an alternative method to survey TE composition. First, we demonstrate in silico that double
Data from: Linkage disequilibrium network analysis (LDna) gives a global view of chromosomal inversions, local adaptation and geographic structure
负责人:
关键词:
Bioinfomatics\/Phyloinfomatics;Landscape Genetics;Anopheles baimaii;Population Genetics - Theoretical;Ecological Genetics;Gasterosteus aculeatus;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.2t764
摘要:
, vertices represent loci, and connections between vertices represent the LD between them. We analysed such networks in two test cases: a new restriction-site
Data from: Efficiency of ddRAD target enriched sequencing across spiny rock lobster species (Palinuridae: Jasus)
负责人:
关键词:
Jasus edwardsii;variant-calling file;probe sequences;Sagmariasus verreauxi;probes sequences
DOI:
doi:10.5061/dryad.3dk40
摘要:
Double digest restriction site-associated DNA sequencing (ddRADseq) and target capture sequencing methods are used to explore population and phylogenetic
Data from: RAD-Seq derived markers flank the shell colour and banding loci of the Cepaea nemoralis supergene
负责人:
关键词:
colour polymorphism;Restriction site associated DNA sequencing;supergene;Cepaea nemoralis;RAD-seq;Heliconius;snail
DOI:
doi:10.5061/dryad.560r4
摘要:
(B). First, scoring of colour and banding in 323 individuals found no recombination between the C and B loci of the supergene. Second, using restriction site
Data from: Signatures of polygenic adaptation associated with climate across the range of a threatened fish species with high genetic connectivity
负责人:
Harrisson, Katherine
关键词:
Adaptation Conservation Genetics Ecological Genetics Fisheries Management Landscape Genetics Wildlife Management
DOI:
doi:10.5061/dryad.57m0f
摘要:
-end restriction-site associated-DNA sequencing data (6605 biallelic single nucleotide polymorphisms; SNPs) to examine population structure and test for signatures
Data from: The population structure and recent colonization history of Oregon threespine stickleback determined using restriction-site associated DNA
负责人:
关键词:
Genomics\/Proteomics;phylogeography;Fish;GBS;RAD-seq;Gasterosteus aculeatus;Adaptation;Population Genetics - Empirical
DOI:
doi:10.5061/dryad.62hb0
摘要:
l maximum. We performed restriction-site associated DNA-sequencing (RAD-seq) based population genomic analyses on stickleback from across Oregon, which was not glaciate
Data from: Within-group relatedness is correlated with colony-level social structure and reproductive sharing in a social fish.
负责人:
关键词:
cooperative breeder;RADseq;Neolamprologus pulcher;Dispersal;neighbor;reproductive skew
DOI:
doi:10.5061/dryad.5632c
摘要:
on of neighbouring social groups in Neolamprologus pulcher, a colonial and group-living cichlid fish. We used restriction site-associated DNA sequencing (RADse

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