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Data from: Concatenation and concordance in the reconstruction of mouse lemur phylogeny: an empirical demonstration of the effect of allele sampling
- 负责人:
- DOI:
- doi:10.5061/dryad.3mt58823
- 摘要:
- mechanisms have been proposed to generate discordance, including differential selection, long-branch attraction, gene duplication, genetic
Data from: Phylogenomics provides new insight into evolutionary relationships and genealogical discordance in the reef-building coral genus Acropora
- 负责人:
- DOI:
- doi:10.5061/dryad.831g1
- 摘要:
- ons, genealogical discordance may reveal genes and genomic regions that contribute to the speciation process. Previous work has shown that conspecific colonies
Data from: Phylogenomics of horned lizards (genus: Phrynosoma) using targeted sequence capture data
- 负责人:
- DOI:
- doi:10.5061/dryad.82p92
- 摘要:
- esidual traces of hybridization. Concatenation and coalescent-based species tree phylogenetic analyses of these new TSC data support the same topolog
Data from: A RAD-sequencing approach to genome-wide marker discovery, genotyping, and phylogenetic inference in a diverse radiation of primates
- 负责人:
- DOI:
- doi:10.5061/dryad.85jn3
- 摘要:
- ons for phylogenetic discordance, including introgression. Our study additionally provides one of the first applications of next-generation sequencing methods
Data from: Ongoing hybridization obscures phylogenetic relationships in the Drosophila subquinaria species complex
- 负责人:
- DOI:
- doi:10.5061/dryad.026np03
- 摘要:
- t both incomplete lineage sorting and gene flow are causing phylogenetic discordance. We suggest that ongoing gene flow primarily from D. recens int
Data from: Phylogenomic analyses reveal a deep history of hybridization and polyploidy in the Neotropical genus Lachemilla (Rosaceae)
- 负责人:
- DOI:
- doi:10.5061/dryad.vj2s888
- 摘要:
- for phylogenetic reconstruction. Here, we use sequence capture data and multiple species tree and species network approaches to resolve the backbone phylogeny of the Neotropic
Data from: Coalescent species delimitation in milksnakes (genus Lampropeltis) and impacts on phylogenetic comparative analyses
- 负责人:
- DOI:
- doi:10.5061/dryad.420h7
- 摘要:
- of gene-tree discordance on evolutionary analyses has been examined previously, the effect of unsampled and cryptic diversity has not. Here, we examine
Data from: Validity of the Diplostomoidea and Diplostomida (Digenea, Platyhelminthes) upheld in phylogenomic analysis
- 负责人:
- DOI:
- doi:10.5061/dryad.7kj7t1q
- 摘要:
- nome phylogeny, but supported in the UCE phylogeny. We speculate this mitonuclear discordance is related to ancient, rapid radiation in the Digenea. Both UCE
Data from: Phylogenetic marker development for target enrichment from transcriptome and genome skim data: the pipeline and its applicati
- 负责人:
- 关键词:
- Species tree;cytonuclear discordance;Target Enrichment;low-copy nuclear genes;Oxalis;genome skimming
- DOI:
- doi:10.5061/dryad.dn08t
- 摘要:
- ry robust, as retrieved through various gene and species tree reconstruction methods as well as concatenation. Cytonuclear discordance was strong. This indic
Data from: Examination of hemiplasy, homoplasy and phylogenetic discordance in chromosomal evolution of the Bovidae
- 负责人:
- 关键词:
- hemiplasy;chromosomes;lineage sorting;Evolution;systematics;hybridization;Cenozoic;Bovidae;Homoplasy
- DOI:
- doi:10.5061/dryad.8332
- 摘要:
- (resulting from secondary contact among taxa), processes that can potentially lead to phylogenetic discordance. We conclude that the most probable