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Data from: How reliably can we infer diversity-dependent diversification from phylogenies?
- 负责人：
- 关键词：
- extinction;Conditioning;Diversity-dependence;Parametric bootstrap;Birth-death model;simulations
- DOI：
- doi:10.5061/dryad.tg37f
- 摘要：
- Slowdowns in lineage accumulation in phylogenies suggest that speciation rates decline as diversity increases. Likelihood methods have been developed
Data from: SuperFine: fast and accurate supertree estimation
- 负责人：
- DOI：
- doi:10.5061/dryad.879st
- 摘要：
- is to use phylogenetic estimation methods (such as maximum likelihood) on a supermatrix produced by concatenating multiple sequence ali
Data from: On the occurrence of false positives in tests of migration under an isolation with migration model
- 负责人：
- DOI：
- doi:10.5061/dryad.ts3t7
- 摘要：
- elated programs, and these analyses frequently include a likelihood ratio test of the null hypothesis of no migration between populations. Cruickshank and Hahn
Data from: Probabilistic methods surpass parsimony when assessing clade support in phylogenetic analyses of discrete morphological data
- 负责人：
- DOI：
- doi:10.5061/dryad.8dd39
- 摘要：
- phylogenetic methods in terms of clade support. We characterize clade support using bootstrapping for parsimony and Maximum Likelihood, and intrinsic Bayesian
Data from: Efficient exploration of the space of reconciled gene trees
- 负责人：
- DOI：
- doi:10.5061/dryad.pv6df
- 摘要：
- nt amalgamated likelihood estimation (ALE), a probabilistic approach to exhaustively explore all reconciled gene trees that can be amalgamated
Data from: Detecting hybridization by likelihood calculation of gene tree extra lineages given explicit models
- 负责人：
- Olave, Melisa
- DOI：
- doi:10.5061/dryad.q084s
- 摘要：
- the likelihood of different models with various levels of gene flow, by comparing the expected gene tree discordance, using the number of extra li
Data from: The summary-likelihood method and its implementation in the Infusion package
- 负责人：
- 关键词：
- phylogeography;Bioinfomatics\/Phyloinfomatics;Population Genetics - Empirical;population dynamics
- DOI：
- doi:10.5061/dryad.4gh7b
- 摘要：
- els where the likelihood is intractable. We describe an alternative approach, summary likelihood, that provides a likelihood-based analysis of the inf
Data from: Equivalence between step selection functions and biased correlated random walks for statistical inference on animal movement
- 负责人：
- 关键词：
- Animal movement biased walk models step selection functions Lagrangian methods maximum likelihood estimation
- DOI：
- doi:10.5061/dryad.217t3
- 摘要：
- Law of Large Numbers to demonstrate that the log-likelihood function for estimating the parameters of BCRW models can be approximated by the log-likelihood of SSFs. Se
Data from: Mapping wood production in European forests
- 负责人：
- DOI：
- doi:10.5061/dryad.mk067
- 摘要：
- location factors. We used regression analyses to produce maps indicating the harvest likelihood on a 1 × 1 km2 grid. These likelihood maps were validated usi
Data from: A penalized likelihood framework for high- dimensional phylogenetic comparative methods and an application to new-world monkeys
- 负责人：
- DOI：
- doi:10.5061/dryad.rf7317t
- 摘要：
- Working with high-dimensional phylogenetic comparative datasets is challenging because likelihood-based multivariate methods suffer from low
