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Data from: High-quality Avicennia marina genome and annotation
负责人:
关键词:
DOI:
doi:10.5061/dryad.3j9kd51f5
摘要:
protein-coding genes using tissue-specific RNA-seq data, from which 13,312 were associated to GO terms. Genome assembly and annotated set of genes yield a 96.7% and 92
Data from: Genome assembly and annotation of Arabidopsis halleri, a model for heavy metal hyperaccumulation and evolutionary ecology
负责人:
关键词:
Arabidopsis halleri;de novo Assembly;heavy metal hyperaccumulator;functional annotation
DOI:
doi:10.5061/dryad.gn4hh
摘要:
now covers 196 Mb or 78% of the estimated genome size and achieved scaffold N50 length of 712 kb. To validate assembly and annotation, we used synteny
Preliminary functional annotation of the sheep genome
负责人:
关键词:
DOI:
doi:10.4225/08/5a03a9c39a0ba
摘要:
In the absence of detailed functional annotation for any livestock genome, we used comparative genomics to predict ovine regulatory elements usi
Data from: The genome sequence and insights into the immunogenetics of the bananaquit (Passeriformes: Coereba flaveola)
负责人:
关键词:
Coereba flaveola;avian genomics;immune system;Toll-like receptor;Major histocompatibility complex;single nucleotide polymorphisms
DOI:
doi:10.5061/dryad.8182t
摘要:
, and annotation of a new avian genome, that of the bananaquit Coereba flaveola (Passeriformes: Thraupidae). We produced ?30-fold coverage of the genome
Data from: Leishmania naiffi and Leishmania guyanensis reference genomes highlight genome structure and gene evolution in the Viannia subgenus
负责人:
关键词:
Infection;Leishmania Viannia naiffi;Leishmania;Leishmania (Viannia) guyanensis;genomics;Evolution;Comparative genomics;Leishmania (Viannia) naiffi
DOI:
doi:10.5061/dryad.4bm23
摘要:
identified 70 additional genes not annotated on the original M2904 reference. Phylogenetic and evolutionary comparisons of L. guyanensis and L. naiffi with ten
A high resolution atlas of gene expression in the domestic sheep (Ovis aries)
负责人:
University Of Edinburgh;;University Of Edinburgh
关键词:
genome Transcriptome functional annotation FAANG sheep Ovis aries ruminant gene expression atlas transcription network Biological Sciences::Genetics
DOI:
doi:10.7488/ds/2112
摘要:
across multiple tissues has aided genome annotation and supported functional annotation of mammalian genes. We present a large-scale RNA-Seq data
Data from: An improved hypergeometric probability method for identification of functionally linked proteins using phylogenetic profiles
负责人:
关键词:
Protein function prediction;functional similarity;phylogenetic profiles;functional annotation
DOI:
doi:10.5061/dryad.m6t4j
摘要:
at the whole-genome level for annotating hypothetical proteins from prokaryotic genomes.
Data from: A phylogenomic analysis of the role and timing of molecular adaptation in the aquatic transition of cetartiodactyl mammals
负责人:
关键词:
Whippomorpha;Mammals;Cetartiodactyla;RNA-seq;transcriptome;Hippopotamidae;Cetacea
DOI:
doi:10.5061/dryad.4cp98
摘要:
of hippopotamus and whales, and 461 genes in cetaceans compared to 64 in hippopotamus. Functional annotation revealed adaptations in diverse processes, including

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