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Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n=50)"" data-category="" data-cropid="" data-dimen="" data-id="AB356D61-05BC-48D1-8E88-E862E74444CD"> Supporting data for "Genome assembly and transcriptome resource for river buffalo, Bubalus bubalis (2n=50)"
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- DOI:
- doi:10.5524/100333
- 摘要:
- ,398 bp. Annotation of the genome was supported by transcriptome data from 30 tissues, and identified 21,711 predicted protein coding genes. Searches
Data from: High-quality Avicennia marina genome and annotation
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- 关键词:
- DOI:
- doi:10.5061/dryad.3j9kd51f5
- 摘要:
- protein-coding genes using tissue-specific RNA-seq data, from which 13,312 were associated to GO terms. Genome assembly and annotated set of genes yield a 96.7% and 92
Data from: Genome assembly and annotation of Arabidopsis halleri, a model for heavy metal hyperaccumulation and evolutionary ecology
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- DOI:
- doi:10.5061/dryad.gn4hh
- 摘要:
- now covers 196 Mb or 78% of the estimated genome size and achieved scaffold N50 length of 712 kb. To validate assembly and annotation, we used synteny
Preliminary functional annotation of the sheep genome
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- 关键词:
- DOI:
- doi:10.4225/08/5a03a9c39a0ba
- 摘要:
- In the absence of detailed functional annotation for any livestock genome, we used comparative genomics to predict ovine regulatory elements usi
Data from: The genome sequence and insights into the immunogenetics of the bananaquit (Passeriformes: Coereba flaveola)
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- DOI:
- doi:10.5061/dryad.8182t
- 摘要:
- , and annotation of a new avian genome, that of the bananaquit Coereba flaveola (Passeriformes: Thraupidae). We produced ?30-fold coverage of the genome
Data from: Leishmania naiffi and Leishmania guyanensis reference genomes highlight genome structure and gene evolution in the Viannia subgenus
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- DOI:
- doi:10.5061/dryad.4bm23
- 摘要:
- identified 70 additional genes not annotated on the original M2904 reference. Phylogenetic and evolutionary comparisons of L. guyanensis and L. naiffi with ten
tial nuclear genomes for the jack species Caranx ignobilis (Forssk?l, 1775) and C. melampygus (Cuvier, 1833" data-category="" data-cropid="" data-dimen="" data-id="b31e72fa-f979-11ea-ae96-0242ac110002"> Data from: "Complete mitochondrial and partial nuclear genomes for the jack species Caranx ignobilis (Forssk?l, 1775) and C. melampygus (Cuvier, 1833
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- DOI:
- doi:10.5061/dryad.6gr7t
- 摘要:
- ) (Perciformes:Carangidae) from the High Hawaiian Islands are presented along with annotation and characterization of intragenomic single nucleoti
A high resolution atlas of gene expression in the domestic sheep (Ovis aries)
- 负责人:
- University Of Edinburgh;;University Of Edinburgh
- 关键词:
- genome Transcriptome functional annotation FAANG sheep Ovis aries ruminant gene expression atlas transcription network Biological Sciences::Genetics
- DOI:
- doi:10.7488/ds/2112
- 摘要:
- across multiple tissues has aided genome annotation and supported functional annotation of mammalian genes. We present a large-scale RNA-Seq data
Data from: An improved hypergeometric probability method for identification of functionally linked proteins using phylogenetic profiles
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- DOI:
- doi:10.5061/dryad.m6t4j
- 摘要:
- at the whole-genome level for annotating hypothetical proteins from prokaryotic genomes.
Data from: A phylogenomic analysis of the role and timing of molecular adaptation in the aquatic transition of cetartiodactyl mammals
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- DOI:
- doi:10.5061/dryad.4cp98
- 摘要:
- of hippopotamus and whales, and 461 genes in cetaceans compared to 64 in hippopotamus. Functional annotation revealed adaptations in diverse processes, including